CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG015583.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG015583.1
T133342_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HIVEP2
M10101_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MIBP1_Q6
0.825
0.978
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG015583.1
C2H2 ZF
246
268
YICPYCNRACAKPSVLKKHIRSH
Alligator_sinensis_CCG015583.1
C2H2 ZF
274
296
YPCVPCGFSFKTKSNLYKHRKSH
Alligator_sinensis_CCG015583.1
C2H2 ZF
1876
1898
YICEECGIRCKKPSMLKKHIRTH
Alligator_sinensis_CCG015583.1
C2H2 ZF
1904
1928
YVCKLCNFAFKTKGNLTKHMKSKAH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
199 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy