CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG016702.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG016702.1
T133360_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZBTB22
M04651_2.00
Homo sapiens
HKCACWAYNRTWGTGMD
HKCACWAYNRTWGTGMD
SELEX
Yin et al.(2017)
ZBTB22_eDBD_HT-SELEX
0.822
0.977
ZBTB22
M04652_2.00
Homo sapiens
HKCACWAYWRTWGTGMD
HKCACWAYWRTWGTGMD
SELEX
Yin et al.(2017)
ZBTB22_eDBD_Methyl-HT-SELEX
0.822
0.977
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG016702.1
C2H2 ZF
384
404
MCHCGKAFSHKSMRDRHVNMH
Alligator_sinensis_CCG016702.1
C2H2 ZF
410
432
FDCPVCNKKFKMKHHLTEHMKTH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy