CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG016799.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG016799.1
T133368_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG016799.1
C2H2 ZF
400
422
YPCHICGKKFKSRGFLKRHMKNH
Alligator_sinensis_CCG016799.1
C2H2 ZF
431
453
YQCTDCDFTTNKKVSFHNHLESH
Alligator_sinensis_CCG016799.1
C2H2 ZF
493
516
HKCKYCDYETAEQGLLNRHLLAVH
Alligator_sinensis_CCG016799.1
C2H2 ZF
522
544
HVCVECGKGFRHPSELKKHMRTH
Alligator_sinensis_CCG016799.1
C2H2 ZF
550
573
YQCQHCVFRCADQSNLKTHIKTKH
Alligator_sinensis_CCG016799.1
C2H2 ZF
579
600
FKCEHCPQAFADEKELQEHTEL
Alligator_sinensis_CCG016799.1
C2H2 ZF
607
630
HQCPHCDHKSTNSSDLKRHIISVH
Alligator_sinensis_CCG016799.1
C2H2 ZF
636
658
HKCEVCEKGFHRPSELKKHSETH
Alligator_sinensis_CCG016799.1
C2H2 ZF
664
687
HQCRHCDFKTSDPFVLSGHILSVH
Alligator_sinensis_CCG016799.1
C2H2 ZF
693
715
FKCKRCKRGFRQQIELKKHMKTH
Alligator_sinensis_CCG016799.1
C2H2 ZF
721
744
YQCQYCEYSTTDASGFKRHVISIH
Alligator_sinensis_CCG016799.1
C2H2 ZF
750
773
HRCEYCKKGFRRPSEKNQHIMRHH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy