Alligator_sinensis_CCG019192.1 (Alligator sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Alligator_sinensis_CCG019192.1 T133418_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYNN
M08283_2.00 		Homo sapiens
GRCTYTTAWTTT
AAAWTAARAGYC		 ChIP-seq
Schmitges et al.(2016)
Q9NPC7_1-4.RCADE 		0.818 0.984
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG019192.1 C2H2 ZF 305 326
Alligator_sinensis_CCG019192.1 C2H2 ZF 332 354
Alligator_sinensis_CCG019192.1 C2H2 ZF 360 383
Alligator_sinensis_CCG019192.1 C2H2 ZF 389 411
Alligator_sinensis_CCG019192.1 C2H2 ZF 417 439
Alligator_sinensis_CCG019192.1 C2H2 ZF 445 467
Alligator_sinensis_CCG019192.1 C2H2 ZF 473 495
Alligator_sinensis_CCG019192.1 C2H2 ZF 501 524

Links

Other C2H2 ZF family TFs
Other Alligator sinensis TFs

Invalid Input OrderBy

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action