Alligator_sinensis_CCG020881.1 (Alligator sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Alligator_sinensis_CCG020881.1 T133450_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZBTB42
M08351_2.00
Homo sapiens
MRCAKCTGS

SCAGMTGYK
ChIP-seq
Schmitges et al.(2016)
B2RXF5_2-4.RCADE
0.773 0.899
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG020881.1 C2H2 ZF 345 367
Alligator_sinensis_CCG020881.1 C2H2 ZF 386 407
Alligator_sinensis_CCG020881.1 C2H2 ZF 413 435
Alligator_sinensis_CCG020881.1 C2H2 ZF 443 464

Links

Other C2H2 ZF family TFs
Other Alligator sinensis TFs

Invalid Input OrderBy

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action