Alligator_sinensis_CCG021550.1 (Alligator sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Alligator_sinensis_CCG021550.1 T133460_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SALL2
M10246_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SALL2_01 		0.815 0.967
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG021550.1 C2H2 ZF 28 50
Alligator_sinensis_CCG021550.1 C2H2 ZF 56 78
Alligator_sinensis_CCG021550.1 C2H2 ZF 305 327
Alligator_sinensis_CCG021550.1 C2H2 ZF 338 359

Links

Other C2H2 ZF family TFs
Other Alligator sinensis TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SALL2 Procavia capensis ENSPCAG00000006689 I 0.815
ENSPPYG00000005600 Pongo abelii ENSPPYG00000005600 I 0.815
ENSPANG00000020006 Papio anubis ENSPANG00000020006 I 0.815
SALL2 Oryctolagus cuniculus ENSOCUG00000027464 I 0.815
ENSAMEG00000006226 Ailuropoda melanoleuca ENSAMEG00000006226 I 0.815
ENSOARG00000019612 Ovis aries ENSOARG00000019612 I 0.815
SALL2 Pan troglodytes ENSPTRG00000006128 I 0.815
SALL2 Pteropus vampyrus ENSPVAG00000000277 I 0.815
ENSP00000333537-D1 Bos grunniens ENSP00000333537-D1 I 0.815
ENSP00000333537 Macaca fascicularis ENSP00000333537 I 0.815
SALL2 Tursiops truncatus ENSTTRG00000012842 I 0.815
ENSSTOG00000023637 Ictidomys tridecemlineatus ENSSTOG00000023637 I 0.815
SALL2 Sus scrofa ENSSSCG00000022705 I 0.815
ENSMPUG00000000199 Mustela putorius furo ENSMPUG00000000199 I 0.815
ENSNLEG00000014602 Nomascus leucogenys ENSNLEG00000014602 I 0.815
SALL2 Dasypus novemcinctus ENSDNOG00000032317 I 0.815
SALL2 Felis catus ENSFCAG00000026866 I 0.815
ENSCSAG00000016461 Chlorocebus sabaeus ENSCSAG00000016461 I 0.815
ENSCPOG00000001022 Cavia porcellus ENSCPOG00000001022 I 0.815
SALL2 Callithrix jacchus ENSCJAG00000008855 I 0.815
SALL2 Homo sapiens ENSG00000165821 D 0.815
SALL2 Equus caballus ENSECAG00000024449 I 0.815
SALL2 Microcebus murinus ENSMICG00000015037 I 0.815
SALL2 Gorilla gorilla ENSGGOG00000009133 I 0.815
ENSMEUG00000000526 Macropus eugenii ENSMEUG00000000526 I 0.815
SALL2 Loxodonta africana ENSLAFG00000032150 I 0.815
CAJ82406 Xenopus tropicalis CAJ82406 I 0.787
Myotis_brandtii_SALL2_10005316 Myotis brandtii Myotis_brandtii_SALL2_10005316 I 0.760
SALL2 Canis familiaris ENSCAFG00000005676 I 0.760
SALL2 Myotis lucifugus ENSMLUG00000009185 I 0.760
Cmyd_10001224 Chelonia mydas Cmyd_10001224 I 0.760
SALL2 Otolemur garnettii ENSOGAG00000031464 I 0.760