CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Brh_R002739
(
Buceros rhinoceros
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Brh_R002739
T133518_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
OVOL2
M00235_2.00
Homo sapiens
NCCGYTANNN
NNNTARCGGN
PBM
Barrera et al.(2016)
OVOL2_REF
0.812
0.946
OVOL2
M04445_2.00
Homo sapiens
NNHCCGYTANNHN
NDNNTARCGGDNN
SELEX
Yin et al.(2017)
OVOL2_eDBD_HT-SELEX
0.812
0.946
OVOL2
M04447_2.00
Homo sapiens
DDWCCGTTABNHN
NDNVTAACGGWHH
SELEX
Yin et al.(2017)
OVOL2_FL_HT-SELEX
0.812
0.946
OVOL2
M10207_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MOVOB_01
0.812
0.946
OVOL2
M04446_2.00
Homo sapiens
NNWCCGTTANNHN
NDNNTAACGGWNN
SELEX
Yin et al.(2017)
OVOL2_eDBD_Methyl-HT-SELEX
0.812
0.946
OVOL2
M04448_2.00
Homo sapiens
DDWCCGTTABNHN
NDNVTAACGGWHH
SELEX
Yin et al.(2017)
OVOL2_FL_Methyl-HT-SELEX
0.812
0.946
Ovol2
M08993_2.00
Mus musculus
HCCGTTAN
NTAACGGD
Misc
Kulakovskiy et al.(2013)
OVOL2_MOUSE.H11MO.0.C
0.803
0.935
OVOL2
M00234_2.00
Homo sapiens
NCCGYTANNN
NNNTARCGGN
PBM
Barrera et al.(2016)
OVOL2_D228E
0.757
0.935
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Brh_R002739
C2H2 ZF
12
34
HSCELCGKGFRLQRMLNRHIKCH
Brh_R002739
C2H2 ZF
35
62
SQVKRHLCTFCGKGFNDTFDLKRHVRTH
Brh_R002739
C2H2 ZF
68
91
YKCEVCNKAFTQRCSLESHLKKIH
Brh_R002739
C2H2 ZF
107
130
YVCEDCGYTGPTQEDLYLHVSNVH
Links
Other
C2H2 ZF
family TFs
Other
Buceros rhinoceros
TFs
53 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy