Brh_R010359 (Buceros rhinoceros)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Brh_R010359 T133636_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Mtf1
M00136_2.00
Mus musculus
CGTGYGCAM

KTGCRCACG
PBM
Badis et al.(2009)
Mtf1_2377
0.809 0.978
MTF1
M02922_2.00
Homo sapiens
GTGCCGTGTGCAAA

TTTGCACACGGCAC
SELEX
Jolma et al.(2013)
MTF1_1
0.809 0.978
MTF1
M04617_2.00
Homo sapiens
NDNDYCGTGTGCAAARN

NYTTTGCACACGRHNHN
SELEX
Yin et al.(2017)
MTF1_eDBD_HT-SELEX
0.809 0.978
MTF1
M08942_2.00
Homo sapiens
MGKVHCGTGYGCADMDB

VHKHTGCRCACGDBMCK
Misc
Kulakovskiy et al.(2013)
MTF1_HUMAN.H11MO.0.C
0.809 0.978
Mtf1
M08981_2.00
Mus musculus
MGKVHCGTGYGCADMDB

VHKHTGCRCACGDBMCK
Misc
Kulakovskiy et al.(2013)
MTF1_MOUSE.H11MO.0.C
0.809 0.978
MTF1
M10308_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MTF1_01
0.809 0.978
MTF1
M10309_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MTF1_02
0.809 0.978
MTF1
M10310_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MTF1_Q4
0.809 0.978
MTF1
M10311_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MTF1_Q5
0.809 0.978
MTF1
M04618_2.00
Homo sapiens
NRNRCCGTGTGCAAARV

BYTTTGCACACGGYNYN
SELEX
Yin et al.(2017)
MTF1_eDBD_Methyl-HT-SELEX
0.809 0.978
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Brh_R010359 C2H2 ZF 142 166
Brh_R010359 C2H2 ZF 172 196
Brh_R010359 C2H2 ZF 202 226
Brh_R010359 C2H2 ZF 231 255
Brh_R010359 C2H2 ZF 261 285
Brh_R010359 C2H2 ZF 291 315

Links

Other C2H2 ZF family TFs
Other Buceros rhinoceros TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
fgenesh1_pg.C_scaffold_8000500 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_8000500 N 0.000
PHACADRAFT_262581 Phanerochaete carnosa PHACADRAFT_262581 N 0.000
PHACADRAFT_146309 Phanerochaete carnosa PHACADRAFT_146309 N 0.000
PAXRUDRAFT_316341 Paxillus rubicundulus PAXRUDRAFT_316341 N 0.000
MPER_15625 Moniliophthora perniciosa MPER_15625 N 0.000
Moror_6337 Moniliophthora roreri Moror_6337 N 0.000
Moror_5897 Moniliophthora roreri Moror_5897 N 0.000
M413DRAFT_170047 Hebeloma cylindrosporum M413DRAFT_170047 N 0.000
M404DRAFT_853889 Pisolithus tinctorius M404DRAFT_853889 N 0.000
PHLGIDRAFT_127046 Phlebiopsis gigantea PHLGIDRAFT_127046 N 0.000
PHLGIDRAFT_80941 Phlebiopsis gigantea PHLGIDRAFT_80941 N 0.000
SERLA73DRAFT_163336 Serpula lacrymans SERLA73DRAFT_163336 N 0.000
SCLCIDRAFT_1222770 Scleroderma citrinum SCLCIDRAFT_1222770 N 0.000
SCLCIDRAFT_1212689 Scleroderma citrinum SCLCIDRAFT_1212689 N 0.000
SCHCODRAFT_81806 Schizophyllum commune SCHCODRAFT_81806 N 0.000
PLEOSDRAFT_1104780 Pleurotus ostreatus PLEOSDRAFT_1104780 N 0.000
PISMIDRAFT_679206 Pisolithus microcarpus PISMIDRAFT_679206 N 0.000
PISMIDRAFT_674680 Pisolithus microcarpus PISMIDRAFT_674680 N 0.000
PILCRDRAFT_821899 Piloderma croceum PILCRDRAFT_821899 N 0.000
M404DRAFT_141478 Pisolithus tinctorius M404DRAFT_141478 N 0.000
M378DRAFT_103014 Amanita muscaria M378DRAFT_103014 N 0.000
LACBIDRAFT_316437 Laccaria bicolor LACBIDRAFT_316437 N 0.000
FOMPIDRAFT_112416 Fomitopsis pinicola FOMPIDRAFT_112416 N 0.000
FOMPIDRAFT_1027511 Fomitopsis pinicola FOMPIDRAFT_1027511 N 0.000
FIBRA_01765 Fibroporia radiculosa FIBRA_01765 N 0.000
CY34DRAFT_92559 Suillus luteus CY34DRAFT_92559 N 0.000
CY34DRAFT_799919 Suillus luteus CY34DRAFT_799919 N 0.000
CERSUDRAFT_94391 Ceriporiopsis subvermispora CERSUDRAFT_94391 N 0.000
CC1G_08004 Coprinopsis cinerea CC1G_08004 N 0.000
AGABI2DRAFT_204681 Agaricus bisporus AGABI2DRAFT_204681 N 0.000
GALMADRAFT_156783 Galerina marginata GALMADRAFT_156783 N 0.000
GLOTRDRAFT_43577 Gloeophyllum trabeum GLOTRDRAFT_43577 N 0.000
K443DRAFT_672954 Laccaria amethystina K443DRAFT_672954 N 0.000
K443DRAFT_671578 Laccaria amethystina K443DRAFT_671578 N 0.000
JAAARDRAFT_66445 Jaapia argillacea JAAARDRAFT_66445 N 0.000
JAAARDRAFT_207038 Jaapia argillacea JAAARDRAFT_207038 N 0.000
HYDPIDRAFT_181816 Hydnomerulius pinastri HYDPIDRAFT_181816 N 0.000
HYDPIDRAFT_137903 Hydnomerulius pinastri HYDPIDRAFT_137903 N 0.000
HETIRDRAFT_317558 Heterobasidion irregulare HETIRDRAFT_317558 N 0.000
GYMLUDRAFT_181224 Gymnopus luxurians GYMLUDRAFT_181224 N 0.000
AGABI2DRAFT_194007 Agaricus bisporus AGABI2DRAFT_194007 N 0.000