Brh_R010947 (Buceros rhinoceros)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Brh_R010947 T133645_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Zfp410
M00140_2.00
Mus musculus
CYATCCCA

TGGGATRG
PBM
Badis et al.(2009)
Zfp410_3034
0.813 0.957
ZNF410
M02882_2.00
Homo sapiens
KVNTATTATGGGATGKN

NMCATCCCATAATANBM
SELEX
Jolma et al.(2013)
ZNF410_1
0.813 0.957
ZNF410
M04435_2.00
Homo sapiens
NTATTATGGGNTRB

VYANCCCATAATAN
SELEX
Yin et al.(2017)
ZNF410_eDBD_HT-SELEX
0.813 0.957
ZNF410
M04436_2.00
Homo sapiens
NTATTATGGGHTRB

VYADCCCATAATAN
SELEX
Yin et al.(2017)
ZNF410_eDBD_Methyl-HT-SELEX
0.813 0.957
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Brh_R010947 C2H2 ZF 216 240
Brh_R010947 C2H2 ZF 246 270
Brh_R010947 C2H2 ZF 276 300
Brh_R010947 C2H2 ZF 306 330
Brh_R010947 C2H2 ZF 337 360

Links

Other C2H2 ZF family TFs
Other Buceros rhinoceros TFs

Invalid Input OrderBy

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action