Ca_22171 (Cicer arietinum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Ca_22171 T133722_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SGR5
M06805_2.00
Arabidopsis thaliana
WTTTTGTCTTWTHYD

HRDAWAAGACAAAAW
Dap-seq
OMalley et al.(2016)
SGR5_col_a
0.818 1.000
SGR5
M06806_2.00
Arabidopsis thaliana
WTTTGTCTYWWHBNN

NNVDWWRAGACAAAW
Dap-seq
OMalley et al.(2016)
SGR5_colamp_a
0.818 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_22171 C2H2 ZF 138 159
Ca_22171 C2H2 ZF 159 184

Links

Other C2H2 ZF family TFs
Other Cicer arietinum TFs

Invalid Input OrderBy

144 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action