Cflo_02191--XP_393879.3_APIME (Camponotus floridanus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Cflo_02191--XP_393879.3_APIME T133763_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
bowl
M03676_2.00
Drosophila melanogaster
GCGTAABACNRGKAGYN

NRCTMCYNGTVTTACGC
SELEX
Nitta et al.(2015)
bowl_1
0.823 0.974
bowl
M03677_2.00
Drosophila melanogaster
NGCTACYGTRTTACGCN

NGCGTAAYACRGTAGCN
SELEX
Nitta et al.(2015)
bowl_2
0.823 0.974
bowl
M06090_2.00
Drosophila melanogaster
RCTWCYGK

MCRGWAGY
B1H
Zhu et al.(2011)
bowl_SANGER_5_FBgn0004893
0.823 0.974
sob
M03674_2.00
Drosophila melanogaster
RCTACYGNRTTACGCV

BGCGTAAYNCRGTAGY
SELEX
Nitta et al.(2015)
sob_1
0.814 0.957
sob
M03675_2.00
Drosophila melanogaster
NGCGTAABNSNRGTAGY

RCTACYNSNVTTACGCN
SELEX
Nitta et al.(2015)
sob_2
0.814 0.957
sob
M06088_2.00
Drosophila melanogaster
GCTWCTGBDNBDV

BHVNHVCAGWAGC
B1H
Zhu et al.(2011)
sob_SANGER_10_FBgn0004892
0.814 0.957
sob
M06089_2.00
Drosophila melanogaster
BDGCTACYGKDBNN

NNVHMCRGTAGCHV
B1H
Zhu et al.(2011)
sob_SOLEXA_5_FBgn0004892
0.814 0.957
OSR2
M04521_2.00
Homo sapiens
NGCTACYGBD

HVCRGTAGCN
SELEX
Yin et al.(2017)
OSR2_eDBD_HT-SELEX
0.795 0.887
OSR2
M08324_2.00
Homo sapiens
NBDGCTNCTGN

NCAGNAGCHVN
ChIP-seq
Schmitges et al.(2016)
Q8N2R0.MEME
0.795 0.887
OSR2
M08908_2.00
Homo sapiens
NBHNYWGCTNCTSHDB

VHDSAGNAGCWRNDVN
Misc
Kulakovskiy et al.(2013)
OSR2_HUMAN.H11MO.0.C
0.795 0.887
OSR2
M04522_2.00
Homo sapiens
NGCTACTGND

HNCAGTAGCN
SELEX
Yin et al.(2017)
OSR2_eDBD_Methyl-HT-SELEX
0.795 0.887
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cflo_02191--XP_393879.3_APIME C2H2 ZF 210 232
Cflo_02191--XP_393879.3_APIME C2H2 ZF 238 260
Cflo_02191--XP_393879.3_APIME C2H2 ZF 266 288
Cflo_02191--XP_393879.3_APIME C2H2 ZF 294 316
Cflo_02191--XP_393879.3_APIME C2H2 ZF 322 344

Links

Other C2H2 ZF family TFs
Other Camponotus floridanus TFs

110 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
SINV18115 Solenopsis invicta SINV18115 I 0.825
ACEP20581 Atta cephalotes ACEP20581 I 0.825
GB49901 Apis mellifera GB49901 I 0.825
GG24967 Drosophila erecta FBgn0117096 I 0.823
GK14650 Drosophila willistoni FBgn0216656 I 0.823
GE18258 Drosophila yakuba FBgn0235686 I 0.823
LCUP002070 Lucilia cuprina LCUP002070 I 0.823
bowl Drosophila melanogaster FBgn0004893 D 0.823
GJ21213 Drosophila virilis FBgn0208346 I 0.823
GD23254 Drosophila simulans FBgn0194642 I 0.823
GI23940 Drosophila mojavensis FBgn0146665 I 0.823
GL18676 Drosophila persimilis FBgn0156277 I 0.823
GH13710 Drosophila grimshawi FBgn0121186 I 0.823
GM18435 Drosophila sechellia FBgn0173342 I 0.823
GF15254 Drosophila ananassae FBgn0092279 I 0.823
L798_02536 Zootermopsis nevadensis L798_02536 I 0.823
GA10014 Drosophila pseudoobscura FBgn0070073 I 0.823
MDOA005526 Musca domestica MDOA005526 I 0.823
TC005784 Tribolium castaneum TC005784 I 0.823
AAEL008961 Aedes aegypti AAEL008961 I 0.823
ODR2 Anopheles gambiae AGAP008222 I 0.823
PHUM445550 Pediculus humanus PHUM445550 I 0.823
NV12189 Nasonia vitripennis NV12189 I 0.821
DAPPUDRAFT_238529 Daphnia pulex DAPPUDRAFT_238529 I 0.821
ACYPI008391 Acyrthosiphon pisum ACYPI008391 I 0.821
DAPPUDRAFT_347540 Daphnia pulex DAPPUDRAFT_347540 I 0.819
KGM_20290 Danaus plexippus KGM_20290 I 0.816
MCINX006060 Melitaea cinxia MCINX006060 I 0.816
ADAC010373 Anopheles darlingi ADAC010373 I 0.815
GI17769 Drosophila mojavensis FBgn0140510 I 0.814
GH13192 Drosophila grimshawi FBgn0120669 I 0.814
GG24427 Drosophila erecta FBgn0116559 I 0.814
GF14663 Drosophila ananassae FBgn0091690 I 0.814
GA25976 Drosophila pseudoobscura FBgn0247353 I 0.814
NV12185 Nasonia vitripennis NV12185 I 0.814
SINV17987 Solenopsis invicta SINV17987 I 0.814
GB49914 Apis mellifera GB49914 I 0.814
GE14841 Drosophila yakuba FBgn0232433 I 0.814
GJ17594 Drosophila virilis FBgn0204764 I 0.814
GK15478 Drosophila willistoni FBgn0217483 I 0.814
GL19470 Drosophila persimilis FBgn0157069 I 0.814
GM18136 Drosophila sechellia FBgn0173043 I 0.814
sob Drosophila melanogaster FBgn0004892 D 0.814
LCUP002077 Lucilia cuprina LCUP002077 I 0.811
AATE001257 Anopheles atroparvus AATE001257 I 0.811
GD22744 Drosophila simulans FBgn0194140 I 0.811
YQE_05719 Dendroctonus ponderosae YQE_05719 I 0.811
PHUM125080 Pediculus humanus PHUM125080 I 0.811
ODR1 Anopheles gambiae AGAP007973 I 0.811
TC005788 Tribolium castaneum TC005788 I 0.811
AEPI004813 Anopheles epiroticus AEPI004813 I 0.811
ACOM030727 Anopheles coluzzii ACOM030727 I 0.811
MDOA011451 Musca domestica MDOA011451 I 0.811
AMIN006295 Anopheles minimus AMIN006295 I 0.811
ASTEI01738 Anopheles stephensi ASTEI01738 I 0.811
AMEM017192 Anopheles merus AMEM017192 I 0.811
AFAF004720 Anopheles farauti AFAF004720 I 0.811
AMEC005957 Anopheles melas AMEC005957 I 0.811
AFUN006320 Anopheles funestus AFUN006320 I 0.811
CPIJ010652 Culex quinquefasciatus CPIJ010652 I 0.809
AAEL007453 Aedes aegypti AAEL007453 I 0.809
ACYPI007518 Acyrthosiphon pisum ACYPI007518 I 0.809
CpipJ_CPIJ010652 Culex pipiens CpipJ_CPIJ010652 I 0.809
ACEP20577 Atta cephalotes ACEP20577 I 0.806
PHUM125070 Pediculus humanus PHUM125070 I 0.806
Cflo_02188--XP_001120905.1_APIME Camponotus floridanus Cflo_02188--XP_001120905.1_APIME I 0.804
estExt_fgenesh2_pg.C_1600105 Branchiostoma floridae estExt_fgenesh2_pg.C_1600105 I 0.803
ADAC005347 Anopheles darlingi ADAC005347 I 0.803
fgenesh2_pg.scaffold_160000107 Branchiostoma floridae fgenesh2_pg.scaffold_160000107 I 0.803
fgenesh2_pg.scaffold_160000114 Branchiostoma floridae fgenesh2_pg.scaffold_160000114 I 0.803
estExt_fgenesh2_pg.C_1600113 Branchiostoma floridae estExt_fgenesh2_pg.C_1600113 I 0.803
L798_02529 Zootermopsis nevadensis L798_02529 I 0.801
ISCW017921 Ixodes scapularis ISCW017921 I 0.799
ISCW005884 Ixodes scapularis ISCW005884 I 0.799
SMAR005255 Strigamia maritima SMAR005255 I 0.799
ENSONIG00000006859 Oreochromis niloticus ENSONIG00000006859 I 0.795
OSR2 Otolemur garnettii ENSOGAG00000007928 I 0.795
OSR2 Ochotona princeps ENSOPRG00000005325 I 0.795
ENSOARG00000002902 Ovis aries ENSOARG00000002902 I 0.795
XP_002934454 Xenopus tropicalis XP_002934454 I 0.795
OSR2 Procavia capensis ENSPCAG00000003419 I 0.795
osr2 Takifugu rubripes ENSTRUG00000011070 I 0.795
ENSTSYG00000013426 Tarsius syrichta ENSTSYG00000013426 I 0.795
OSR2 Tursiops truncatus ENSTTRG00000007477 I 0.795
ENSSHAG00000007793 Sarcophilus harrisii ENSSHAG00000007793 I 0.795
OSR2 Pteropus vampyrus ENSPVAG00000004363 I 0.795
ENSPPYG00000018781 Pongo abelii ENSPPYG00000018781 I 0.795
OSR2 Pan troglodytes ENSPTRG00000020463 I 0.795
osr2 Oryzias latipes ENSORLG00000002797 I 0.795
OSR2 Erinaceus europaeus ENSEEUG00000008304 I 0.795
ENSFALG00000005731 Ficedula albicollis ENSFALG00000005731 I 0.795
OSR2 Homo sapiens ENSG00000164920 D 0.795
ENSGALG00000016016 Gallus gallus ENSGALG00000016016 I 0.795
ENSAMEG00000000519 Ailuropoda melanoleuca ENSAMEG00000000519 I 0.795
OSR2 Canis familiaris ENSCAFG00000000493 I 0.795
Osr2 Dipodomys ordii ENSDORG00000011823 I 0.795
OSR2 Callithrix jacchus ENSCJAG00000015627 I 0.795
ENSMMUP00000029201 Macaca fascicularis ENSMMUP00000029201 I 0.795
OSR2 Gorilla gorilla ENSGGOG00000006716 I 0.795
ENSNLEG00000002725 Nomascus leucogenys ENSNLEG00000002725 I 0.795
OSR2 Macaca mulatta ENSMMUG00000022185 I 0.795
OSR2 Microcebus murinus ENSMICG00000004390 I 0.795
OSR2 Equus caballus ENSECAG00000017784 I 0.795
Sakowv30016612m.g Saccoglossus kowalevskii Sakowv30016612m.g I 0.793
tetur09g03230 Tetranychus urticae tetur09g03230 I 0.788
SMAR002904 Strigamia maritima SMAR002904 I 0.788
SPU_024877 Strongylocentrotus purpuratus SPU_024877 I 0.785
D917_07818 Trichinella nativa D917_07818 I 0.760
D917_03163 Trichinella nativa D917_03163 I 0.760
EFV49300 Trichinella spiralis EFV49300 I 0.760