Cflo_04170--XP_001120914.1_APIME (Camponotus floridanus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Cflo_04170--XP_001120914.1_APIME T133782_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
sens
M03666_2.00
Drosophila melanogaster
TGCWSTGATTTATY

RATAAATCASWGCA
SELEX
Nitta et al.(2015)
sens_1
0.788 0.919
sens
M06056_2.00
Drosophila melanogaster
AAATCACDGC

GCHGTGATTT
B1H
Zhu et al.(2011)
sens_SANGER_10_FBgn0002573
0.788 0.919
sens
M06057_2.00
Drosophila melanogaster
NNNNAAATCACRGCH

DGCYGTGATTTNNNN
B1H
Zhu et al.(2011)
sens_SOLEXA_5_FBgn0002573
0.788 0.919
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cflo_04170--XP_001120914.1_APIME C2H2 ZF 1 21
Cflo_04170--XP_001120914.1_APIME C2H2 ZF 27 49
Cflo_04170--XP_001120914.1_APIME C2H2 ZF 55 77
Cflo_04170--XP_001120914.1_APIME C2H2 ZF 83 101

Links

Other C2H2 ZF family TFs
Other Camponotus floridanus TFs

Invalid Input OrderBy

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action