Cflo_04377--XP_391847.3_APIME (Camponotus floridanus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Cflo_04377--XP_391847.3_APIME T133786_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Blimp-1
M03692_2.00
Drosophila melanogaster
NNYACTTTCVYYN

NRRBGAAAGTRNN
SELEX
Nitta et al.(2015)
Blimp-1_1
0.815 0.974
Blimp-1
M06141_2.00
Drosophila melanogaster
ACTTTCACTTTY

RAAAGTGAAAGT
B1H
Zhu et al.(2011)
Blimp-1_NAR_FBgn0035625
0.815 0.974
Blimp-1
M06142_2.00
Drosophila melanogaster
RCTTTCMCTTTY

RAAAGKGAAAGY
B1H
Zhu et al.(2011)
Blimp-1_SANGER_5_FBgn0035625
0.815 0.974
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cflo_04377--XP_391847.3_APIME C2H2 ZF 766 788
Cflo_04377--XP_391847.3_APIME C2H2 ZF 794 816
Cflo_04377--XP_391847.3_APIME C2H2 ZF 822 844
Cflo_04377--XP_391847.3_APIME C2H2 ZF 850 872
Cflo_04377--XP_391847.3_APIME C2H2 ZF 878 899

Links

Other C2H2 ZF family TFs
Other Camponotus floridanus TFs

Invalid Input OrderBy

76 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action