Cflo_07707--XP_393944.1_APIME (Camponotus floridanus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Cflo_07707--XP_393944.1_APIME T133824_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
wor
M03664_2.00
Drosophila melanogaster
GYRACAGGTGYAH

DTRCACCTGTYRC
SELEX
Nitta et al.(2015)
wor_1
0.779 0.842
wor
M03665_2.00
Drosophila melanogaster
DTRCACCTGTYGY

RCRACAGGTGYAH
SELEX
Nitta et al.(2015)
wor_2
0.779 0.842
wor
M06051_2.00
Drosophila melanogaster
CACCTGY

RCAGGTG
B1H
Zhu et al.(2011)
wor_SANGER_2.5_FBgn0001983
0.779 0.842
wor
M06052_2.00
Drosophila melanogaster
VCACCTGY

RCAGGTGB
B1H
Zhu et al.(2011)
wor_SOLEXA_2.5_FBgn0001983
0.779 0.842
esg
M06050_2.00
Drosophila melanogaster
CACCTGH

DCAGGTG
B1H
Zhu et al.(2011)
esg_SANGER_2.5_FBgn0001981
0.771 0.860
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cflo_07707--XP_393944.1_APIME C2H2 ZF 312 334
Cflo_07707--XP_393944.1_APIME C2H2 ZF 346 368
Cflo_07707--XP_393944.1_APIME C2H2 ZF 372 394
Cflo_07707--XP_393944.1_APIME C2H2 ZF 400 422
Cflo_07707--XP_393944.1_APIME C2H2 ZF 428 449

Links

Other C2H2 ZF family TFs
Other Camponotus floridanus TFs

Invalid Input OrderBy

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action