Cflo_12390--XP_396560.3_APIME (Camponotus floridanus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Cflo_12390--XP_396560.3_APIME T133908_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
FEZF1
M08307_2.00
Homo sapiens
NNBTGYYYTTTTNNN

NNNAAAARRRCAVNN
ChIP-seq
Schmitges et al.(2016)
A0PJY2_1-5.RCADE
0.796 0.920
FEZF1
M08889_2.00
Homo sapiens
DYTGYYCWTTTN

NAAAWGRRCARH
Misc
Kulakovskiy et al.(2013)
FEZF1_HUMAN.H11MO.0.C
0.796 0.920
erm
M03686_2.00
Drosophila melanogaster
TGATTGCTCWTTT

AAAWGAGCAATCA
SELEX
Nitta et al.(2015)
CG31670_1
0.790 0.913
erm
M06128_2.00
Drosophila melanogaster
KWTGYKCWTTT

AAAWGMRCAWM
B1H
Zhu et al.(2011)
CG31670_SANGER_5_FBgn0031375
0.790 0.913
erm
M06129_2.00
Drosophila melanogaster
BBRTTGCTCWTTTBN

NVAAAWGAGCAAYVV
B1H
Zhu et al.(2011)
CG31670_SOLEXA_5_FBgn0031375
0.790 0.913
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cflo_12390--XP_396560.3_APIME C2H2 ZF 173 195
Cflo_12390--XP_396560.3_APIME C2H2 ZF 201 223
Cflo_12390--XP_396560.3_APIME C2H2 ZF 229 251
Cflo_12390--XP_396560.3_APIME C2H2 ZF 257 279
Cflo_12390--XP_396560.3_APIME C2H2 ZF 285 307
Cflo_12390--XP_396560.3_APIME C2H2 ZF 313 336

Links

Other C2H2 ZF family TFs
Other Camponotus floridanus TFs

Invalid Input OrderBy

175 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action