Cla018101 (Citrullus lanatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Cla018101 T133962_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
JKD
M06818_2.00
Arabidopsis thaliana
HHNWWTTTTGTCKTTTWBYD

HRVWAAAMGACAAAAWWNDD
Dap-seq
OMalley et al.(2016)
JKD_col_a
0.822 0.953
IDD5
M06807_2.00
Arabidopsis thaliana
DNTTTTGTCKTTTTSYD

HRSAAAAMGACAAAANH
Dap-seq
OMalley et al.(2016)
IDD5_colamp_a
0.797 0.953
IDD5
M06808_2.00
Arabidopsis thaliana
WTTTTGTCKTTTWSYD

HRSWAAAMGACAAAAW
Dap-seq
OMalley et al.(2016)
IDD5_col
0.797 0.953
AT1G14580
M06797_2.00
Arabidopsis thaliana
NNNWWTTTTGTCKTTTWSYD

HRSWAAAMGACAAAAWWNNN
Dap-seq
OMalley et al.(2016)
At1g14580_col_a
0.797 0.907
AT1G14580
M06798_2.00
Arabidopsis thaliana
NNTTTTGTCKTTTWSYD

HRSWAAAMGACAAAANN
Dap-seq
OMalley et al.(2016)
At1g14580_colamp_a
0.797 0.907
IDD7
M06803_2.00
Arabidopsis thaliana
NDDTTTTGTCKTTTWBYD

HRVWAAAMGACAAAAHHN
Dap-seq
OMalley et al.(2016)
IDD7_col_a
0.792 0.930
IDD4
M06809_2.00
Arabidopsis thaliana
WWTTTTGTCKTTTWSYD

HRSWAAAMGACAAAAWW
Dap-seq
OMalley et al.(2016)
IDD4_col_a
0.792 0.884
MGP
M06795_2.00
Arabidopsis thaliana
HNHDWTTTTGTCKTTTWNYD

HRNWAAAMGACAAAAWHDND
Dap-seq
OMalley et al.(2016)
MGP_col_a
0.792 0.884
MGP
M06796_2.00
Arabidopsis thaliana
NNDTTTTGTCKTTTWBYD

HRVWAAAMGACAAAAHNN
Dap-seq
OMalley et al.(2016)
MGP_colamp_a
0.792 0.884
NUC
M06822_2.00
Arabidopsis thaliana
NNNNNTTTTGTCKTYTWBYD

HRVWARAMGACAAAANNNNN
Dap-seq
OMalley et al.(2016)
NUC_col_a
0.768 0.860
NUC
M06823_2.00
Arabidopsis thaliana
NDTTTTGTCGTYTWNYD

HRNWARACGACAAAAHN
Dap-seq
OMalley et al.(2016)
NUC_colamp_a
0.768 0.860
IDD1
M06824_2.00
Arabidopsis thaliana
DNTTTTGTCKTTTWBYD

HRVWAAAMGACAAAANH
Dap-seq
OMalley et al.(2016)
At5g66730_colamp_a
0.759 0.907
IDD1
M06825_2.00
Arabidopsis thaliana
WDTTTTGTCKTTTWNYD

HRNWAAAMGACAAAAHW
Dap-seq
OMalley et al.(2016)
At5g66730_col
0.759 0.907
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla018101 C2H2 ZF 145 166
Cla018101 C2H2 ZF 165 191

Links

Other C2H2 ZF family TFs
Other Citrullus lanatus TFs

640 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL014322 Aedes aegypti AAEL014322 I 0.000
AALB008334 Anopheles albimanus AALB008334 I 0.000
AARA002094 Anopheles arabiensis AARA002094 I 0.000
AATE018889 Anopheles atroparvus AATE018889 I 0.000
ACHR010174 Anopheles christyi ACHR010174 I 0.000
ACOM034431 Anopheles coluzzii ACOM034431 I 0.000
ACUA006973 Anopheles culicifacies ACUA006973 I 0.000
ADAC002492 Anopheles darlingi ADAC002492 I 0.000
ADIR010448 Anopheles dirus ADIR010448 I 0.000
AEPI006062 Anopheles epiroticus AEPI006062 I 0.000
AFAF001067 Anopheles farauti AFAF001067 I 0.000
AFUN011634 Anopheles funestus AFUN011634 I 0.000
AMAM006832 Anopheles maculatus AMAM006832 I 0.000
AMEM001613 Anopheles merus AMEM001613 I 0.000
AMIN003460 Anopheles minimus AMIN003460 I 0.000
AQUA000514 Anopheles quadriannulatus AQUA000514 I 0.000
ASTEI05690 Anopheles stephensi ASTEI05690 I 0.000
GB55306 Apis mellifera GB55306 I 0.000
estExt_gwp.C_290160 Branchiostoma floridae estExt_gwp.C_290160 I 0.000
fgenesh2_pg.scaffold_226000031 Branchiostoma floridae fgenesh2_pg.scaffold_226000031 I 0.000
fgenesh2_pg.scaffold_226000032 Branchiostoma floridae fgenesh2_pg.scaffold_226000032 I 0.000
fgenesh2_pg.scaffold_29000123 Branchiostoma floridae fgenesh2_pg.scaffold_29000123 I 0.000
estExt_fgenesh2_pg.C_2260029 Branchiostoma floridae estExt_fgenesh2_pg.C_2260029 I 0.000
Cflo_03885--XP_001120527.1_APIME Camponotus floridanus Cflo_03885--XP_001120527.1_APIME I 0.000
CapteG36721 Capitella teleta CapteG36721 I 0.000
CLEC002330 Cimex lectularius CLEC002330 I 0.000
CGI_10007380 Crassostrea gigas CGI_10007380 I 0.000
CpipJ_CPIJ005345 Culex pipiens CpipJ_CPIJ005345 I 0.000
CPIJ005345 Culex quinquefasciatus CPIJ005345 I 0.000
YQE_11476 Dendroctonus ponderosae YQE_11476 I 0.000
GF18746 Drosophila ananassae FBgn0095763 I 0.000
GG12413 Drosophila erecta FBgn0104701 I 0.000
GH13904 Drosophila grimshawi FBgn0121380 I 0.000
nau Drosophila melanogaster FBgn0002922 D 0.000
GI24830 Drosophila mojavensis FBgn0147551 I 0.000
GL13832 Drosophila persimilis FBgn0151437 I 0.000
GA10192 Drosophila pseudoobscura FBgn0070251 I 0.000
GM23547 Drosophila sechellia FBgn0178413 I 0.000
GD18361 Drosophila simulans FBgn0189889 I 0.000
GJ24474 Drosophila virilis FBgn0211554 I 0.000
GK22777 Drosophila willistoni FBgn0224749 I 0.000
GE23932 Drosophila yakuba FBgn0241076 I 0.000
ECANG7_02004 Echinococcus canadensis ECANG7_02004 I 0.000
EmuJ_001053100 Echinococcus multilocularis EmuJ_001053100 I 0.000
ECPE_0001678601 Echinostoma caproni ECPE_0001678601 I 0.000
EVEC_0000720901 Enterobius vermicularis EVEC_0000720901 I 0.000
D915_09890 Fasciola hepatica D915_09890 I 0.000
Hsal_05065--XP_001120527.1_APIME Harpegnathos saltator Hsal_05065--XP_001120527.1_APIME I 0.000
HmN_000553800 Hymenolepis microstoma HmN_000553800 I 0.000
HNAJ_0001324201 Hymenolepis nana HNAJ_0001324201 I 0.000
LDEC009949 Leptinotarsa decemlineata LDEC009949 I 0.000
LCUP007809 Lucilia cuprina LCUP007809 I 0.000
LLOJ004446 Lutzomyia longipalpis LLOJ004446 I 0.000
MCOS_0000168001 Mesocestoides corti MCOS_0000168001 I 0.000
NV10294 Nasonia vitripennis NV10294 I 0.000
Ocbimv22002759m.g Octopus bimaculoides Ocbimv22002759m.g I 0.000
T265_10140 Opisthorchis viverrini T265_10140 I 0.000
PHUM424120 Pediculus humanus PHUM424120 I 0.000
RPRC009735 Rhodnius prolixus RPRC009735 I 0.000
nRc.2.0.1.g24248 Romanomermis culicivorax nRc.2.0.1.g24248 I 0.000
Sakowv30008488m.g Saccoglossus kowalevskii Sakowv30008488m.g I 0.000
SSLN_0000613901 Schistocephalus solidus SSLN_0000613901 I 0.000
A_07871 Schistosoma haematobium A_07871 I 0.000
Sjc_0011830 Schistosoma japonicum Sjc_0011830 I 0.000
Smp_167400 Schistosoma mansoni Smp_167400 I 0.000
SMU15001149 Schmidtea mediterranea SMU15001149 I 0.000
SBAD_0001285401 Soboliphyme baturini SBAD_0001285401 I 0.000
SPER_0001779001 Spirometra erinaceieuropaei SPER_0001779001 I 0.000
SPER_0002215301 Spirometra erinaceieuropaei SPER_0002215301 I 0.000
SPU_021119 Strongylocentrotus purpuratus SPU_021119 I 0.000
SMUV_0000995901 Syphacia muris SMUV_0000995901 I 0.000
TASK_0000583801 Taenia asiatica TASK_0000583801 I 0.000
TsM_000079400 Taenia solium TsM_000079400 I 0.000
myod1 Tetraodon nigroviridis ENSTNIG00000002808 I 0.000
TC015855 Tribolium castaneum TC015855 I 0.000
D917_06339 Trichinella nativa D917_06339 I 0.000
EFV52759 Trichinella spiralis EFV52759 I 0.000
TRE_0000306101 Trichobilharzia regenti TRE_0000306101 I 0.000
TMUE_s0045001800 Trichuris muris TMUE_s0045001800 I 0.000
D918_04086 Trichuris suis D918_04086 I 0.000
TTRE_0000002701 Trichuris trichiura TTRE_0000002701 I 0.000