Cla022854 (Citrullus lanatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Cla022854 T133972_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
IDD7
M06803_2.00
Arabidopsis thaliana
NDDTTTTGTCKTTTWBYD

HRVWAAAMGACAAAAHHN
Dap-seq
OMalley et al.(2016)
IDD7_col_a
0.821 0.953
IDD4
M06809_2.00
Arabidopsis thaliana
WWTTTTGTCKTTTWSYD

HRSWAAAMGACAAAAWW
Dap-seq
OMalley et al.(2016)
IDD4_col_a
0.821 0.884
MGP
M06795_2.00
Arabidopsis thaliana
HNHDWTTTTGTCKTTTWNYD

HRNWAAAMGACAAAAWHDND
Dap-seq
OMalley et al.(2016)
MGP_col_a
0.821 0.884
MGP
M06796_2.00
Arabidopsis thaliana
NNDTTTTGTCKTTTWBYD

HRVWAAAMGACAAAAHNN
Dap-seq
OMalley et al.(2016)
MGP_colamp_a
0.821 0.884
IDD5
M06807_2.00
Arabidopsis thaliana
DNTTTTGTCKTTTTSYD

HRSAAAAMGACAAAANH
Dap-seq
OMalley et al.(2016)
IDD5_colamp_a
0.816 0.907
IDD5
M06808_2.00
Arabidopsis thaliana
WTTTTGTCKTTTWSYD

HRSWAAAMGACAAAAW
Dap-seq
OMalley et al.(2016)
IDD5_col
0.816 0.907
AT1G14580
M06797_2.00
Arabidopsis thaliana
NNNWWTTTTGTCKTTTWSYD

HRSWAAAMGACAAAAWWNNN
Dap-seq
OMalley et al.(2016)
At1g14580_col_a
0.816 0.860
AT1G14580
M06798_2.00
Arabidopsis thaliana
NNTTTTGTCKTTTWSYD

HRSWAAAMGACAAAANN
Dap-seq
OMalley et al.(2016)
At1g14580_colamp_a
0.816 0.860
NUC
M06822_2.00
Arabidopsis thaliana
NNNNNTTTTGTCKTYTWBYD

HRVWARAMGACAAAANNNNN
Dap-seq
OMalley et al.(2016)
NUC_col_a
0.797 0.860
NUC
M06823_2.00
Arabidopsis thaliana
NDTTTTGTCGTYTWNYD

HRNWARACGACAAAAHN
Dap-seq
OMalley et al.(2016)
NUC_colamp_a
0.797 0.860
JKD
M06818_2.00
Arabidopsis thaliana
HHNWWTTTTGTCKTTTWBYD

HRVWAAAMGACAAAAWWNDD
Dap-seq
OMalley et al.(2016)
JKD_col_a
0.791 0.930
IDD1
M06824_2.00
Arabidopsis thaliana
DNTTTTGTCKTTTWBYD

HRVWAAAMGACAAAANH
Dap-seq
OMalley et al.(2016)
At5g66730_colamp_a
0.788 0.907
IDD1
M06825_2.00
Arabidopsis thaliana
WDTTTTGTCKTTTWNYD

HRNWAAAMGACAAAAHW
Dap-seq
OMalley et al.(2016)
At5g66730_col
0.788 0.907
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla022854 C2H2 ZF 138 159
Cla022854 C2H2 ZF 158 184

Links

Other C2H2 ZF family TFs
Other Citrullus lanatus TFs

632 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
nAv.1.0.1.g03900 Acanthocheilonema viteae nAv.1.0.1.g03900 N 0.000
ACYPI008028 Acyrthosiphon pisum ACYPI008028 N 0.000
AAEL010903 Aedes aegypti AAEL010903 N 0.000
Aqu1.224100 Amphimedon queenslandica Aqu1.224100 N 0.000
ANCCAN_09575 Ancylostoma caninum ANCCAN_09575 N 0.000
ANCCAN_03785 Ancylostoma caninum ANCCAN_03785 N 0.000
ANCCEY_02937 Ancylostoma ceylanicum ANCCEY_02937 N 0.000
ANCDUO_12071 Ancylostoma duodenale ANCDUO_12071 N 0.000
ACAC_0000207501 Angiostrongylus cantonensis ACAC_0000207501 N 0.000
ASIM_0001578601 Anisakis simplex ASIM_0001578601 N 0.000
ASIM_0001639001 Anisakis simplex ASIM_0001639001 N 0.000
AALB002196 Anopheles albimanus AALB002196 N 0.000
AARA006951 Anopheles arabiensis AARA006951 N 0.000
AATE020748 Anopheles atroparvus AATE020748 N 0.000
ACHR000824 Anopheles christyi ACHR000824 N 0.000
ACOM023536 Anopheles coluzzii ACOM023536 N 0.000
ACUA002517 Anopheles culicifacies ACUA002517 N 0.000
ADAC004863 Anopheles darlingi ADAC004863 N 0.000
ADIR010513 Anopheles dirus ADIR010513 N 0.000
AEPI007457 Anopheles epiroticus AEPI007457 N 0.000
AFAF004631 Anopheles farauti AFAF004631 N 0.000
AFUN008276 Anopheles funestus AFUN008276 N 0.000
AGAP001994 Anopheles gambiae AGAP001994 N 0.000
AMAM007470 Anopheles maculatus AMAM007470 N 0.000
AMEC010472 Anopheles melas AMEC010472 N 0.000
AMEM015770 Anopheles merus AMEM015770 N 0.000
AMIN003302 Anopheles minimus AMIN003302 N 0.000
AQUA007127 Anopheles quadriannulatus AQUA007127 N 0.000
ASIS021704 Anopheles sinensis ASIS021704 N 0.000
ASTEI00336 Anopheles stephensi ASTEI00336 N 0.000
GB50847 Apis mellifera GB50847 N 0.000
ALUE_0000987201 Ascaris lumbricoides ALUE_0000987201 N 0.000
ASU_02248 Ascaris suum ASU_02248 N 0.000
ACEP21543 Atta cephalotes ACEP21543 N 0.000
BGIBMGA009228 Bombyx mori BGIBMGA009228 N 0.000
fgenesh2_pg.scaffold_137000001 Branchiostoma floridae fgenesh2_pg.scaffold_137000001 N 0.000
Bm7076 Brugia malayi Bm7076 N 0.000
ENSCJAG00000006608 Callithrix jacchus ENSCJAG00000006608 N 0.000
Cflo_00654--XP_395543.3_APIME Camponotus floridanus Cflo_00654--XP_395543.3_APIME N 0.000
CapteG156119 Capitella teleta CapteG156119 N 0.000
CLEC001104 Cimex lectularius CLEC001104 N 0.000
CLEC009203 Cimex lectularius CLEC009203 N 0.000
ENSCING00000007774 Ciona intestinalis ENSCING00000007774 N 0.000
ENSCSAVG00000010367 Ciona savignyi ENSCSAVG00000010367 N 0.000
csin103376 Clonorchis sinensis csin103376 N 0.000
CpipJ_CPIJ018416 Culex pipiens CpipJ_CPIJ018416 N 0.000
CpipJ_CPIJ007400 Culex pipiens CpipJ_CPIJ007400 N 0.000
CPIJ007400 Culex quinquefasciatus CPIJ007400 N 0.000
CPIJ018416 Culex quinquefasciatus CPIJ018416 N 0.000
KGM_12870 Danaus plexippus KGM_12870 N 0.000
DAPPUDRAFT_305068 Daphnia pulex DAPPUDRAFT_305068 N 0.000
YQE_02381 Dendroctonus ponderosae YQE_02381 N 0.000
nDi.2.2.2.g02092 Dirofilaria immitis nDi.2.2.2.g02092 N 0.000
DME_0000063901 Dracunculus medinensis DME_0000063901 N 0.000
GF19131 Drosophila ananassae FBgn0096142 N 0.000
GG18291 Drosophila erecta FBgn0110507 N 0.000
GH12291 Drosophila grimshawi FBgn0119770 N 0.000
dalao Drosophila melanogaster FBgn0030093 N 0.000
GI15536 Drosophila mojavensis FBgn0138285 N 0.000
GL26801 Drosophila persimilis FBgn0164382 N 0.000
GA26137 Drosophila pseudoobscura FBgn0247513 N 0.000
GM13722 Drosophila sechellia FBgn0168653 N 0.000
GJ14880 Drosophila virilis FBgn0202084 N 0.000
GK25765 Drosophila willistoni FBgn0227724 N 0.000
GE15824 Drosophila yakuba FBgn0233388 N 0.000
ECANG7_05376 Echinococcus canadensis ECANG7_05376 N 0.000
EmuJ_000113200 Echinococcus multilocularis EmuJ_000113200 N 0.000
EEL_0000522201 Elaeophora elaphi EEL_0000522201 N 0.000
EVEC_0000378901 Enterobius vermicularis EVEC_0000378901 N 0.000
D915_15883 Fasciola hepatica D915_15883 N 0.000
ENSFCAG00000026463 Felis catus ENSFCAG00000026463 N 0.000
ENSGMOG00000002045 Gadus morhua ENSGMOG00000002045 N 0.000
SMARCE1 Gasterosteus aculeatus ENSGACG00000018114 N 0.000
ENSGGOG00000026277 Gorilla gorilla ENSGGOG00000026277 N 0.000
ENSGGOG00000024929 Gorilla gorilla ENSGGOG00000024929 N 0.000
HCOI00022200 Haemonchus contortus HCOI00022200 N 0.000
HCOI00569400 Haemonchus contortus HCOI00569400 N 0.000
HPLM_0001658301 Haemonchus placei HPLM_0001658301 N 0.000
HHAL002088-PA Halyomorpha halys HHAL002088-PA N 0.000
HHAL007378-PA Halyomorpha halys HHAL007378-PA N 0.000
Hsal_01302--XP_395543.3_APIME Harpegnathos saltator Hsal_01302--XP_395543.3_APIME N 0.000
HMEL010720 Heliconius melpomene HMEL010720 N 0.000
HPBE_0000083501 Heligmosomoides bakeri HPBE_0000083501 N 0.000
HelroG188630 Helobdella robusta HelroG188630 N 0.000
XP_002158206.1 Hydra magnipapillata XP_002158206.1 N 0.000
HDID_0000207001 Hymenolepis diminuta HDID_0000207001 N 0.000
ISCW021016 Ixodes scapularis ISCW021016 N 0.000
LDEC003494 Leptinotarsa decemlineata LDEC003494 N 0.000
nLs.2.1.2.g01047 Litomosoides sigmodontis nLs.2.1.2.g01047 N 0.000
LOAG_01279 Loa loa LOAG_01279 N 0.000
LotgiG111061 Lottia gigantea LotgiG111061 N 0.000
LCUP013669 Lucilia cuprina LCUP013669 N 0.000
LLOJ006040 Lutzomyia longipalpis LLOJ006040 N 0.000
MhA1_Contig1809.frz3.gene8 Meloidogyne hapla MhA1_Contig1809.frz3.gene8 N 0.000
MCOS_0000928101 Mesocestoides corti MCOS_0000928101 N 0.000
MDOA009352 Musca domestica MDOA009352 N 0.000
NV11999 Nasonia vitripennis NV11999 N 0.000
NECAME_16117 Necator americanus NECAME_16117 N 0.000
NEMVEDRAFT_v1g177453 Nematostella vectensis NEMVEDRAFT_v1g177453 N 0.000
OESDEN_21929 Oesophagostomum dentatum OESDEN_21929 N 0.000
OESDEN_12607 Oesophagostomum dentatum OESDEN_12607 N 0.000
OFLC_0001285101 Onchocerca flexuosa OFLC_0001285101 N 0.000
nOo.2.0.1.g01360 Onchocerca ochengi nOo.2.0.1.g01360 N 0.000
WBGene00245293 Onchocerca volvulus WBGene00245293 N 0.000
T265_02983 Opisthorchis viverrini T265_02983 N 0.000
ENSONIG00000006293 Oreochromis niloticus ENSONIG00000006293 N 0.000
ENSOCUG00000016848 Oryctolagus cuniculus ENSOCUG00000016848 N 0.000
smarce1 Oryzias latipes ENSORLG00000018629 N 0.000
PPAI002058 Phlebotomus papatasi PPAI002058 N 0.000
ENSPFOG00000009890 Poecilia formosa ENSPFOG00000009890 N 0.000
ENSPFOG00000019561 Poecilia formosa ENSPFOG00000019561 N 0.000
ENSPPYG00000012585 Pongo abelii ENSPPYG00000012585 N 0.000
PXEA_0001727801 Protopolystoma xenopodis PXEA_0001727801 N 0.000
AC123471.1 Rattus norvegicus ENSRNOG00000018377 N 0.000
RSKR_0000347900 Rhabditophanes kr3021 RSKR_0000347900 N 0.000
Sakowv30017721m.g Saccoglossus kowalevskii Sakowv30017721m.g N 0.000
SSLN_0001888901 Schistocephalus solidus SSLN_0001888901 N 0.000
SCUD_0000923501 Schistosoma curassoni SCUD_0000923501 N 0.000
A_05744 Schistosoma haematobium A_05744 N 0.000
Sjc_0000110 Schistosoma japonicum Sjc_0000110 N 0.000
Smp_154640 Schistosoma mansoni Smp_154640 N 0.000
SMTD_0000014601 Schistosoma mattheei SMTD_0000014601 N 0.000
SROB_0000607501 Schistosoma rodhaini SROB_0000607501 N 0.000
SMU15005679 Schmidtea mediterranea SMU15005679 N 0.000
SMU15025606 Schmidtea mediterranea SMU15025606 N 0.000
SMAR004982 Strigamia maritima SMAR004982 N 0.000
SPU_009282 Strongylocentrotus purpuratus SPU_009282 N 0.000
SVUK_0000819801 Strongylus vulgaris SVUK_0000819801 N 0.000
SMUV_0000644601 Syphacia muris SMUV_0000644601 N 0.000
TASK_0000875901 Taenia asiatica TASK_0000875901 N 0.000
TsM_000047400 Taenia solium TsM_000047400 N 0.000
smarce1 Takifugu rubripes ENSTRUG00000012899 N 0.000
TELCIR_14354 Teladorsagia circumcincta TELCIR_14354 N 0.000
smarce1 Tetraodon nigroviridis ENSTNIG00000014009 N 0.000
TCLT_0000145301 Thelazia callipaeda TCLT_0000145301 N 0.000
TC007745 Tribolium castaneum TC007745 N 0.000
TriadG53566 Trichoplax adhaerens TriadG53566 N 0.000
TMUE_s0023006500 Trichuris muris TMUE_s0023006500 N 0.000
D918_01415 Trichuris suis D918_01415 N 0.000
TTRE_0000149701 Trichuris trichiura TTRE_0000149701 N 0.000
WUBG_07283 Wuchereria bancrofti WUBG_07283 N 0.000
AAH41216 Xenopus laevis AAH41216 N 0.000
ENSXMAG00000002642 Xiphophorus maculatus ENSXMAG00000002642 N 0.000
L798_00593 Zootermopsis nevadensis L798_00593 N 0.000