CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Cmyd_10001224
(
Chelonia mydas
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Cmyd_10001224
T134056_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SALL2
M10246_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SALL2_01
0.772
0.989
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cmyd_10001224
C2H2 ZF
273
295
HKCRFCAKVFGSDSALQIHLRSH
Cmyd_10001224
C2H2 ZF
301
323
YKCNVCGNRFTTRGNLKVHFHRH
Cmyd_10001224
C2H2 ZF
535
557
FKCKVCGRAFSTRGNLRAHFVGH
Cmyd_10001224
C2H2 ZF
568
589
SCPICQKKFTNAVSLQQHVRMH
Links
Other
C2H2 ZF
family TFs
Other
Chelonia mydas
TFs
33 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Myotis_brandtii_SALL2_10005316
Myotis brandtii
Myotis_brandtii_SALL2_10005316
I
0.827
SALL2
Canis familiaris
ENSCAFG00000005676
I
0.827
SALL2
Myotis lucifugus
ENSMLUG00000009185
I
0.827
SALL2
Otolemur garnettii
ENSOGAG00000031464
I
0.827
SALL2
Anolis carolinensis
ENSACAG00000000030
I
0.821
Ogr13603
Ophisaurus gracilis
Ogr13603
I
0.819
ENSPPYG00000005600
Pongo abelii
ENSPPYG00000005600
I
0.772
SALL2
Procavia capensis
ENSPCAG00000006689
I
0.772
ENSPANG00000020006
Papio anubis
ENSPANG00000020006
I
0.772
SALL2
Pan troglodytes
ENSPTRG00000006128
I
0.772
SALL2
Sus scrofa
ENSSSCG00000022705
I
0.772
ENSP00000333537-D1
Bos grunniens
ENSP00000333537-D1
I
0.772
ENSP00000333537
Macaca fascicularis
ENSP00000333537
I
0.772
SALL2
Tursiops truncatus
ENSTTRG00000012842
I
0.772
ENSSTOG00000023637
Ictidomys tridecemlineatus
ENSSTOG00000023637
I
0.772
SALL2
Oryctolagus cuniculus
ENSOCUG00000027464
I
0.772
SALL2
Pteropus vampyrus
ENSPVAG00000000277
I
0.772
ENSNLEG00000014602
Nomascus leucogenys
ENSNLEG00000014602
I
0.772
SALL2
Dasypus novemcinctus
ENSDNOG00000032317
I
0.772
SALL2
Equus caballus
ENSECAG00000024449
I
0.772
ENSCSAG00000016461
Chlorocebus sabaeus
ENSCSAG00000016461
I
0.772
ENSCPOG00000001022
Cavia porcellus
ENSCPOG00000001022
I
0.772
ENSAMEG00000006226
Ailuropoda melanoleuca
ENSAMEG00000006226
I
0.772
SALL2
Callithrix jacchus
ENSCJAG00000008855
I
0.772
ENSOARG00000019612
Ovis aries
ENSOARG00000019612
I
0.772
SALL2
Felis catus
ENSFCAG00000026866
I
0.772
SALL2
Microcebus murinus
ENSMICG00000015037
I
0.772
ENSMPUG00000000199
Mustela putorius furo
ENSMPUG00000000199
I
0.772
ENSMEUG00000000526
Macropus eugenii
ENSMEUG00000000526
I
0.772
SALL2
Loxodonta africana
ENSLAFG00000032150
I
0.772
SALL2
Homo sapiens
ENSG00000165821
D
0.772
SALL2
Gorilla gorilla
ENSGGOG00000009133
I
0.772
Alligator_sinensis_CCG021550.1
Alligator sinensis
Alligator_sinensis_CCG021550.1
I
0.760