CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cmyd_10002814
(
Chelonia mydas
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Cmyd_10002814
T134195_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF777
M05857_2.00
Homo sapiens
GHCCSYCCCGTCSARCAAW
WTTGYTSGACGGGRSGGDC
SMiLE-seq
Isakova et al.(2017)
ZNF777
0.767
0.821
ZNF777
M07703_2.00
Homo sapiens
CCGACGK
MCGTCGG
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF777.MEME.OriginalMapping
0.767
0.821
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cmyd_10002814
C2H2 ZF
300
322
YICPECGKSFMLKINFIIHQRNH
Cmyd_10002814
C2H2 ZF
328
350
YECNECDLSFRIKQQFILHQRSH
Cmyd_10002814
C2H2 ZF
383
405
YKCTECESSFSHKSSLSKHQITH
Cmyd_10002814
C2H2 ZF
411
433
YTCSECRKSFRLQISLIMHQRIH
Cmyd_10002814
C2H2 ZF
441
463
FICPQCGKNFSRPSHLLRHQRTH
Cmyd_10002814
C2H2 ZF
469
491
YKCTQCEKTFSEKSKLTNHYRIH
Cmyd_10002814
C2H2 ZF
497
519
HACTECGKGFIRKHHLLEHQRIH
Cmyd_10002814
C2H2 ZF
525
547
YHCTECGKNFTQKHHLLEHQRAH
Cmyd_10002814
C2H2 ZF
553
575
YPCTECTKCFRYKQSLKYHLRTH
Links
Other
C2H2 ZF
family TFs
Other
Chelonia mydas
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy