Cmyd_10002814 (Chelonia mydas)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Cmyd_10002814 T134195_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF777
M05857_2.00 		Homo sapiens
GHCCSYCCCGTCSARCAAW
WTTGYTSGACGGGRSGGDC		 SMiLE-seq
Isakova et al.(2017)
ZNF777 		0.767 0.821
ZNF777
M07703_2.00 		Homo sapiens
CCGACGK
MCGTCGG		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF777.MEME.OriginalMapping 		0.767 0.821
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10002814 C2H2 ZF 300 322
Cmyd_10002814 C2H2 ZF 328 350
Cmyd_10002814 C2H2 ZF 383 405
Cmyd_10002814 C2H2 ZF 411 433
Cmyd_10002814 C2H2 ZF 441 463
Cmyd_10002814 C2H2 ZF 469 491
Cmyd_10002814 C2H2 ZF 497 519
Cmyd_10002814 C2H2 ZF 525 547
Cmyd_10002814 C2H2 ZF 553 575

Links

Other C2H2 ZF family TFs
Other Chelonia mydas TFs

Invalid Input OrderBy

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action