CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cmyd_10005145
(
Chelonia mydas
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Cmyd_10005145
T134263_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZBTB48
M08391_2.00
Homo sapiens
HHDNTCCCTDR
YHAGGGANHDD
ChIP-seq
Schmitges et al.(2016)
P10074.MEME
0.811
0.952
ZBTB48
M08956_2.00
Homo sapiens
BHBRVTCCCTDR
YHAGGGABYVDV
Misc
Kulakovskiy et al.(2013)
ZBT48_HUMAN.H11MO.0.C
0.811
0.952
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cmyd_10005145
C2H2 ZF
115
137
VECPTCHKTFLSKYYLKVHNRKH
Cmyd_10005145
C2H2 ZF
143
164
FECSKCGKCYFRKENLLEHEAR
Cmyd_10005145
C2H2 ZF
174
196
FTCSVCQEIFKRRMELRLHMVSH
Cmyd_10005145
C2H2 ZF
202
225
YKCPSCVQQFMQKKDLQSHMIKLH
Cmyd_10005145
C2H2 ZF
260
283
FVCEECGHRASSRNGLQMHIKAKH
Cmyd_10005145
C2H2 ZF
289
311
YVCEFCHHAFTQKANLNMHLRTH
Cmyd_10005145
C2H2 ZF
317
339
FQCHLCGKTFRTQASLDKHNRTH
Cmyd_10005145
C2H2 ZF
345
368
FSCEFCDQRFTEKGPLLRHIASRH
Cmyd_10005145
C2H2 ZF
374
396
HFCQICGKTFKAVEQLRVHVRRH
Cmyd_10005145
C2H2 ZF
402
424
FECTECGYKFTRQAHLRRHMEIH
Links
Other
C2H2 ZF
family TFs
Other
Chelonia mydas
TFs
39 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy