CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cmyd_10005165
(
Chelonia mydas
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Cmyd_10005165
T134264_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cmyd_10005165
C2H2 ZF
152
174
LPCGLCGKVFTDANRLRQHEAQH
Cmyd_10005165
C2H2 ZF
216
237
ACEICGKIFRDVYHLNRHKLSH
Cmyd_10005165
C2H2 ZF
243
265
YSCPVCGLRFKRKDRMSYHVRSH
Cmyd_10005165
C2H2 ZF
273
296
YICQSCGKGFSRPDHLNGHIKQVH
Cmyd_10005165
C2H2 ZF
302
324
HKCQTCNASFATRDRLRSHLACH
Links
Other
C2H2 ZF
family TFs
Other
Chelonia mydas
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Patz1
Rattus norvegicus
ENSRNOG00000018709
N
0.827
ENSPSIG00000011562
Pelodiscus sinensis
ENSPSIG00000011562
I
0.827
PATZ1
Sus scrofa
ENSSSCG00000010027
N
0.827
PATZ1
Taeniopygia guttata
ENSTGUG00000009749
N
0.827
Ogr03452
Ophisaurus gracilis
Ogr03452
N
0.827
Alligator_sinensis_CCG014139.1
Alligator sinensis
Alligator_sinensis_CCG014139.1
N
0.827
PATZ1
Canis familiaris
ENSCAFG00000013087
I
0.827
Patz1
Mus musculus
ENSMUSG00000020453
I
0.827
PATZ1
Homo sapiens
ENSG00000100105
D
0.827
PATZ1
Felis catus
ENSFCAG00000030253
N
0.827
PATZ1
Equus caballus
ENSECAG00000025030
N
0.827
ENSCSAG00000008746
Chlorocebus sabaeus
ENSCSAG00000008746
N
0.827
PATZ1
Myotis lucifugus
ENSMLUG00000009942
I
0.827
PATZ1
Macaca mulatta
ENSMMUG00000013911
I
0.827
ENSMPUG00000012814
Mustela putorius furo
ENSMPUG00000012814
N
0.827
PATZ1
Oryctolagus cuniculus
ENSOCUG00000002323
N
0.825
PATZ1
Ochotona princeps
ENSOPRG00000002286
N
0.825
ENSOARG00000010061
Ovis aries
ENSOARG00000010061
N
0.818