Cmyd_10005916 (Chelonia mydas)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Cmyd_10005916 T134287_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZNF653
M08248_2.00
Homo sapiens
NWTTHNYDHCYKCCGACWNHWAWD

HWTWDNWGTCGGMRGDHRNDAAWN
ChIP-seq
Najafabadi et al.(2015b)
ZNF653
0.811 0.965
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10005916 C2H2 ZF 355 380
Cmyd_10005916 C2H2 ZF 386 410
Cmyd_10005916 C2H2 ZF 416 438
Cmyd_10005916 C2H2 ZF 444 466
Cmyd_10005916 C2H2 ZF 474 497

Links

Other C2H2 ZF family TFs
Other Chelonia mydas TFs

Invalid Input OrderBy

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action