Cmyd_10007876 (Chelonia mydas)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Cmyd_10007876 T134307_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZBTB2
M04595_2.00
Homo sapiens
NNTYCCGGTWMH

DKWACCGGRANN
SELEX
Yin et al.(2017)
ZBTB2_eDBD_HT-SELEX
0.824 0.985
ZBTB2
M10284_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZBTB2_Q3_01
0.824 0.985
ZBTB2
M10285_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZBTB2_Q3
0.824 0.985
ZBTB2
M04596_2.00
Homo sapiens
GTTTCCGGTAMY

RKTACCGGAAAC
SELEX
Yin et al.(2017)
ZBTB2_eDBD_Methyl-HT-SELEX
0.824 0.985
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10007876 C2H2 ZF 361 383
Cmyd_10007876 C2H2 ZF 388 409
Cmyd_10007876 C2H2 ZF 446 466

Links

Other C2H2 ZF family TFs
Other Chelonia mydas TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
DOTSEDRAFT_67512 Dothistroma septosporum DOTSEDRAFT_67512 N 0.000
estExt_fgenesh1_kg.C_chr_50040 Mycosphaerella graminicola estExt_fgenesh1_kg.C_chr_50040 N 0.000
estExt_fgenesh1_kg.C_chr_120182 Mycosphaerella graminicola estExt_fgenesh1_kg.C_chr_120182 N 0.000
SEPMUDRAFT_146029 Sphaerulina musiva SEPMUDRAFT_146029 N 0.000
SEPMUDRAFT_136763 Sphaerulina musiva SEPMUDRAFT_136763 N 0.000
Mycgr3G106406 Zymoseptoria tritici Mycgr3G106406 N 0.000
Mycgr3G104366 Zymoseptoria tritici Mycgr3G104366 N 0.000
MYCFIDRAFT_214689 Pseudocercospora fijiensis MYCFIDRAFT_214689 N 0.000
DOTSEDRAFT_72023 Dothistroma septosporum DOTSEDRAFT_72023 N 0.000
estExt_fgenesh1_pg.C_chr_120359 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_120359 N 0.000