Cmyd_10008308 (Chelonia mydas)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Cmyd_10008308 T134310_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZNF821
M04412_2.00
Homo sapiens
NYGTCBGTCTGTCYD

HRGACAGACVGACRN
SELEX
Yin et al.(2017)
ZNF821_FL_HT-SELEX
0.827 0.957
ZNF821
M04413_2.00
Homo sapiens
NYGTCYGTCYGTCCN

NGGACRGACRGACRN
SELEX
Yin et al.(2017)
ZNF821_FL_Methyl-HT-SELEX
0.827 0.957
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10008308 C2H2 ZF 5 27
Cmyd_10008308 C2H2 ZF 37 59

Links

Other C2H2 ZF family TFs
Other Chelonia mydas TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Brh_R011430 Buceros rhinoceros Brh_R011430 I 0.827
ZNF821 Callithrix jacchus ENSCJAG00000015044 I 0.827
ZNF821 Homo sapiens ENSG00000102984 D 0.827
ENSPSIG00000006555 Pelodiscus sinensis ENSPSIG00000006555 I 0.803
ZNF821 Gallus gallus ENSGALG00000000817 I 0.790
ZNF821 Meleagris gallopavo ENSMGAG00000008865 I 0.790