CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cmyd_10012256
(
Chelonia mydas
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Cmyd_10012256
T134369_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZBTB7C
M02920_2.00
Homo sapiens
DCRACCACCVHN
NDBGGTGGTYGH
SELEX
Jolma et al.(2013)
ZBTB7C_1
0.827
0.989
ZBTB7C
M10289_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZBTB7C_Q2
0.827
0.989
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cmyd_10012256
C2H2 ZF
115
137
QQCPICNKVIMGAGKLPRHMRTH
Cmyd_10012256
C2H2 ZF
143
165
YMCTICEVRFTRQDKLKIHMRKH
Cmyd_10012256
C2H2 ZF
171
193
YLCIHCNAKFVHNYDLKNHMRIH
Cmyd_10012256
C2H2 ZF
199
220
YQCEFCYKSFTRSDHLHRHIKR
Links
Other
C2H2 ZF
family TFs
Other
Chelonia mydas
TFs
52 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy