Cmyd_10014359 (Chelonia mydas)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Cmyd_10014359 T134392_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB20
M04599_2.00 		Homo sapiens
NVYATACRTYVN
NBRAYGTATRBN		 SELEX
Yin et al.(2017)
ZBTB20_eDBD_HT-SELEX 		0.783 0.991
ZBTB20
M04600_2.00 		Homo sapiens
NVYATACRTTNN
NNAAYGTATRBN		 SELEX
Yin et al.(2017)
ZBTB20_eDBD_Methyl-HT-SELEX 		0.783 0.991
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10014359 C2H2 ZF 587 609
Cmyd_10014359 C2H2 ZF 615 637
Cmyd_10014359 C2H2 ZF 643 665
Cmyd_10014359 C2H2 ZF 671 693
Cmyd_10014359 C2H2 ZF 723 745

Links

Other C2H2 ZF family TFs
Other Chelonia mydas TFs

Invalid Input OrderBy

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action