CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cmyd_10016754
(
Chelonia mydas
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Cmyd_10016754
T134433_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF276
M04495_2.00
Homo sapiens
NWAAGGWSGWVDMKACNHCCTTWAN
NTWAAGGDNGTMKHBWCSWCCTTWN
SELEX
Yin et al.(2017)
ZNF276_eDBD_HT-SELEX
0.816
0.974
ZNF276
M04496_2.00
Homo sapiens
STTAAGGBSGWVWATACYHCCTTAMN
NKTAAGGDRGTATWBWCSVCCTTAAS
SELEX
Yin et al.(2017)
ZNF276_eDBD_Methyl-HT-SELEX
0.816
0.974
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cmyd_10016754
C2H2 ZF
396
421
YKCPYQGCTAVYRGADGMKKHIKEHH
Cmyd_10016754
C2H2 ZF
428
452
PCPHPGCNKVFMIDRYLQRHVKLIH
Cmyd_10016754
C2H2 ZF
458
480
YICDECGQTFKQRKHLSVHQMRH
Cmyd_10016754
C2H2 ZF
486
508
LQCEICGFQCRQRASLKYHMTKH
Cmyd_10016754
C2H2 ZF
516
539
FACDQCGKRFEKAHNLNVHMSMVH
Links
Other
C2H2 ZF
family TFs
Other
Chelonia mydas
TFs
67 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy