Cmyd_10017122 (Chelonia mydas)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Cmyd_10017122 T134448_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZBTB26
M04547_2.00
Homo sapiens
NYDTTCTRGADH

DHTCYAGAAHRN
SELEX
Yin et al.(2017)
ZBTB26_FL_HT-SELEX
0.827 1.000
ZBTB26
M08340_2.00
Homo sapiens
CRCGCRCRCDCRCRMRCRCRC

GYGYGYKYGYGHGYGYGCGYG
ChIP-seq
Schmitges et al.(2016)
Q9HCK0.MEME
0.827 1.000
ZBTB26
M04548_2.00
Homo sapiens
NBDTTCTRGADN

NHTCYAGAAHVN
SELEX
Yin et al.(2017)
ZBTB26_FL_Methyl-HT-SELEX
0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10017122 C2H2 ZF 101 123
Cmyd_10017122 C2H2 ZF 126 148
Cmyd_10017122 C2H2 ZF 154 176
Cmyd_10017122 C2H2 ZF 182 205

Links

Other C2H2 ZF family TFs
Other Chelonia mydas TFs

58 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F443_18634 Phytophthora parasitica F443_18634 N 0.000
fgenesh_masked-pir_contig_645-abinit-gene-0.24 Pythium irregulare fgenesh_masked-pir_contig_645-abinit-gene-0.24 N 0.000
fgenesh_scip_prom.28083.8324 Phytophthora lateralis fgenesh_scip_prom.28083.8324 N 0.000
fgenesh_scip_prom.46568.4978 Phytophthora kernoviae fgenesh_scip_prom.46568.4978 N 0.000
HpaG802975 Hyaloperonospora arabidopsidis HpaG802975 N 0.000
maker-pag1_scaffold_113-fgenesh-gene-0.10 Pythium aphanidermatum maker-pag1_scaffold_113-fgenesh-gene-0.10 N 0.000
Phyra78708 Phytophthora ramorum Phyra78708 N 0.000
Physo133941 Phytophthora sojae Physo133941 N 0.000
PITG_19851 Phytophthora infestans PITG_19851 N 0.000
PYU1_G013838 Pythium ultimum PYU1_G013838 N 0.000