CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cmyd_10017123
(
Chelonia mydas
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Cmyd_10017123
T134449_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZBTB6
M08364_2.00
Homo sapiens
SBNGCTCCAKVDYCN
NGRHBMTGGAGCNVS
ChIP-seq
Schmitges et al.(2016)
Q15916.MEME
0.807
0.957
ZBTB6
M08940_2.00
Homo sapiens
NRGCTCCAKCDYC
GRHGMTGGAGCYN
Misc
Kulakovskiy et al.(2013)
ZBTB6_HUMAN.H11MO.0.C
0.807
0.957
ZBTB6
M10307_2.00
Homo sapiens
BGGCTCYAKSRYC
GRYSMTRGAGCCV
Transfac
Matys et al.(2006)
V$ZID_01
0.807
0.957
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cmyd_10017123
C2H2 ZF
170
192
HQCPKCPRGFVHLENYLRHLKMH
Cmyd_10017123
C2H2 ZF
195
217
FLCLQCGKTFTQKKNLNRHIRGH
Cmyd_10017123
C2H2 ZF
223
245
FQCMVCLKTFTAKSTLQDHLNIH
Cmyd_10017123
C2H2 ZF
251
274
YKCHCCDMDFKHKSALKKHLTSVH
Links
Other
C2H2 ZF
family TFs
Other
Chelonia mydas
TFs
49 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy