CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cmyd_10020158
(
Chelonia mydas
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Cmyd_10020158
T134466_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Sall1
M10342_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SALL1_04
0.827
1.000
Sall1
M10343_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SALL1_05
0.827
1.000
Sall1
M10344_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SALL1_06
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cmyd_10020158
C2H2 ZF
411
433
HKCRFCAKVFGSDSALQIHLRSH
Cmyd_10020158
C2H2 ZF
439
461
FKCNICGNRFSTKGNLKVHFQRH
Cmyd_10020158
C2H2 ZF
694
716
FKCKICGRAFTTKGNLKTHYSVH
Cmyd_10020158
C2H2 ZF
726
748
HSCPICQKKFTNAVVLQQHIRMH
Cmyd_10020158
C2H2 ZF
961
983
TACDICGKTFACQSALDIHYRSH
Cmyd_10020158
C2H2 ZF
989
1011
FICTVCNRGFSTKGNLKQHMLTH
Cmyd_10020158
C2H2 ZF
1094
1116
HYCNTCGKTFSSSSALQIHERTH
Cmyd_10020158
C2H2 ZF
1122
1144
FACTICGRAFTTKGNLKVHMGTH
Links
Other
C2H2 ZF
family TFs
Other
Chelonia mydas
TFs
50 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy