CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSBTAP00000000066-D1
(
Bos grunniens
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
ENSBTAP00000000066-D1
T134479_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Prdm14
M09001_2.00
Mus musculus
NHRGKKCTCTAMCHHN
NDDGKTAGAGMMCYDN
Misc
Kulakovskiy et al.(2013)
PRD14_MOUSE.H11MO.0.A
0.761
0.883
PRDM14
M08897_2.00
Homo sapiens
NRGGWCYCTAACYH
DRGTTAGRGWCCYN
Misc
Kulakovskiy et al.(2013)
PRD14_HUMAN.H11MO.0.A
0.761
0.927
PRDM14
M09509_2.00
Homo sapiens
RSTTAGRGACCY
RGGTCYCTAASY
Misc
Heinz et al.(2010)
H1-PRDM14_GSE22767
0.761
0.927
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSBTAP00000000066-D1
C2H2 ZF
400
421
YRCERCGKVFTYKYYRDKHLKY
ENSBTAP00000000066-D1
C2H2 ZF
432
455
FPCSLCKRSFEKRDRLRIHILHVH
ENSBTAP00000000066-D1
C2H2 ZF
461
483
HKCSTCGKCFSQSSSLNKHMRVH
ENSBTAP00000000066-D1
C2H2 ZF
489
511
YHCVYCTKKFTASSILRTHIRQH
ENSBTAP00000000066-D1
C2H2 ZF
517
540
FKCKYCGKSFASHAAHDSHVRRSH
ENSBTAP00000000066-D1
C2H2 ZF
546
568
SPCNTCGKTFSDQEAFHSHMKSH
Links
Other
C2H2 ZF
family TFs
Other
Bos grunniens
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy