ENSBTAP00000008535-D1 (Bos grunniens)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 ENSBTAP00000008535-D1 T134519_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Mtf1
M00136_2.00
Mus musculus
CGTGYGCAM

KTGCRCACG
PBM
Badis et al.(2009)
Mtf1_2377
0.827 1.000
MTF1
M02922_2.00
Homo sapiens
GTGCCGTGTGCAAA

TTTGCACACGGCAC
SELEX
Jolma et al.(2013)
MTF1_1
0.827 1.000
MTF1
M04617_2.00
Homo sapiens
NDNDYCGTGTGCAAARN

NYTTTGCACACGRHNHN
SELEX
Yin et al.(2017)
MTF1_eDBD_HT-SELEX
0.827 1.000
MTF1
M08942_2.00
Homo sapiens
MGKVHCGTGYGCADMDB

VHKHTGCRCACGDBMCK
Misc
Kulakovskiy et al.(2013)
MTF1_HUMAN.H11MO.0.C
0.827 1.000
Mtf1
M08981_2.00
Mus musculus
MGKVHCGTGYGCADMDB

VHKHTGCRCACGDBMCK
Misc
Kulakovskiy et al.(2013)
MTF1_MOUSE.H11MO.0.C
0.827 1.000
MTF1
M10308_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MTF1_01
0.827 1.000
MTF1
M10309_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MTF1_02
0.827 1.000
MTF1
M10310_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MTF1_Q4
0.827 1.000
MTF1
M10311_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MTF1_Q5
0.827 1.000
MTF1
M04618_2.00
Homo sapiens
NRNRCCGTGTGCAAARV

BYTTTGCACACGGYNYN
SELEX
Yin et al.(2017)
MTF1_eDBD_Methyl-HT-SELEX
0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSBTAP00000008535-D1 C2H2 ZF 140 164
ENSBTAP00000008535-D1 C2H2 ZF 170 194
ENSBTAP00000008535-D1 C2H2 ZF 200 224
ENSBTAP00000008535-D1 C2H2 ZF 229 253
ENSBTAP00000008535-D1 C2H2 ZF 259 283
ENSBTAP00000008535-D1 C2H2 ZF 289 313

Links

Other C2H2 ZF family TFs
Other Bos grunniens TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29417.m000034 Ricinus communis 29417.m000034 N 0.000
30090.m000247 Ricinus communis 30090.m000247 N 0.000
AMTR_s00032p00241350 Amborella trichopoda AMTR_s00032p00241350 N 0.000
AMTR_s00033p00166000 Amborella trichopoda AMTR_s00033p00166000 N 0.000
AMTR_s00059p00116150 Amborella trichopoda AMTR_s00059p00116150 N 0.000
Aquca_016_00081 Aquilegia coerulea Aquca_016_00081 N 0.000
AT2G12646 Arabidopsis thaliana AT2G12646 N 0.000
BGIOSGA007009 Oryza indica BGIOSGA007009 N 0.000
BGIOSGA007635 Oryza indica BGIOSGA007635 N 0.000
BGIOSGA023427 Oryza indica BGIOSGA023427 N 0.000
Bo3g087070 Brassica oleracea Bo3g087070 N 0.000
Bo9g022400 Brassica oleracea Bo9g022400 N 0.000
Bostr.22685s0001 Boechera stricta Bostr.22685s0001 N 0.000
Bra013149 Brassica rapa Bra013149 N 0.000
Bra037203 Brassica rapa Bra037203 N 0.000
BRADI1G32050 Brachypodium distachyon BRADI1G32050 N 0.000
BRADI3G05380 Brachypodium distachyon BRADI3G05380 N 0.000
BRADI3G06190 Brachypodium distachyon BRADI3G06190 N 0.000
Cagra.2506s0001 Capsella grandiflora Cagra.2506s0001 N 0.000
Carubv10015124m.g Capsella rubella Carubv10015124m.g N 0.000
cassava11490.m1 Manihot esculenta cassava11490.m1 N 0.000
cassava41034.m1 Manihot esculenta cassava41034.m1 N 0.000
cassava446.valid.m1 Manihot esculenta cassava446.valid.m1 N 0.000
Ca_06740 Cicer arietinum Ca_06740 N 0.000
chr6.CM0037.1230.nd Lotus japonicus chr6.CM0037.1230.nd N 0.000
Ciclev10010747m.g Citrus clementina Ciclev10010747m.g N 0.000
Cucsa.132770 Cucumis sativus Cucsa.132770 N 0.000
Eucgr.C00450 Eucalyptus grandis Eucgr.C00450 N 0.000
Eucgr.D00032 Eucalyptus grandis Eucgr.D00032 N 0.000
evm.TU.supercontig_46.74 Carica papaya evm.TU.supercontig_46.74 N 0.000
fgenesh2_kg.3__2996__AT2G12646.1 Arabidopsis lyrata fgenesh2_kg.3__2996__AT2G12646.1 N 0.000
gene30812-v1.0-hybrid Fragaria vesca gene30812-v1.0-hybrid N 0.000
GLYMA09G12330 Glycine max GLYMA09G12330 N 0.000
GLYMA13G23360 Glycine max GLYMA13G23360 N 0.000
GLYMA15G23920 Glycine max GLYMA15G23920 N 0.000
GLYMA17G11470 Glycine max GLYMA17G11470 N 0.000
Gorai.004G110400 Gossypium raimondii Gorai.004G110400 N 0.000
Gorai.009G013500 Gossypium raimondii Gorai.009G013500 N 0.000
Gorai.010G057300 Gossypium raimondii Gorai.010G057300 N 0.000
GRMZM2G017882 Zea mays GRMZM2G017882 N 0.000
GRMZM2G070295 Zea mays GRMZM2G070295 N 0.000
GSMUA_Achr11G04210_001 Musa acuminata GSMUA_Achr11G04210_001 N 0.000
GSMUA_Achr1G09990_001 Musa acuminata GSMUA_Achr1G09990_001 N 0.000
GSMUA_Achr2G02580_001 Musa acuminata GSMUA_Achr2G02580_001 N 0.000
GSMUA_Achr6G35220_001 Musa acuminata GSMUA_Achr6G35220_001 N 0.000
GSMUA_Achr7G03600_001 Musa acuminata GSMUA_Achr7G03600_001 N 0.000
GSMUA_Achr8G33510_001 Musa acuminata GSMUA_Achr8G33510_001 N 0.000
GSMUA_Achr9G22490_001 Musa acuminata GSMUA_Achr9G22490_001 N 0.000
GSMUA_Achr9G30790_001 Musa acuminata GSMUA_Achr9G30790_001 N 0.000
GSMUA_AchrUn_randomG23740_001 Musa acuminata GSMUA_AchrUn_randomG23740_001 N 0.000
LPERR02G04770 Leersia perrieri LPERR02G04770 N 0.000
LPERR02G05550 Leersia perrieri LPERR02G05550 N 0.000
LPERR06G19930 Leersia perrieri LPERR06G19930 N 0.000
Lus10008031.g Linum usitatissimum Lus10008031.g N 0.000
Lus10008814.g Linum usitatissimum Lus10008814.g N 0.000
Lus10038103.g Linum usitatissimum Lus10038103.g N 0.000
Lus10039989.g Linum usitatissimum Lus10039989.g N 0.000
MDP0000639526 Malus domestica MDP0000639526 N 0.000
mgf020898m Mimulus guttatus mgf020898m N 0.000
MLOC_21744 Hordeum vulgare MLOC_21744 N 0.000
MLOC_37403 Hordeum vulgare MLOC_37403 N 0.000
MTR_4g116300 Medicago truncatula MTR_4g116300 N 0.000
OB02G14750 Oryza brachyantha OB02G14750 N 0.000
OB02G15630 Oryza brachyantha OB02G15630 N 0.000
OBART02G05520 Oryza barthii OBART02G05520 N 0.000
OBART06G24000 Oryza barthii OBART06G24000 N 0.000
OGLUM02G05380 Oryza glumaepatula OGLUM02G05380 N 0.000
OGLUM06G25260 Oryza glumaepatula OGLUM06G25260 N 0.000
OLONG_011712 Oryza longistaminata OLONG_011712 N 0.000
OMERI06G23930 Oryza meridionalis OMERI06G23930 N 0.000
ONIVA02G05860 Oryza nivara ONIVA02G05860 N 0.000
ONIVA03G43780 Oryza nivara ONIVA03G43780 N 0.000
OPUNC02G04680 Oryza punctata OPUNC02G04680 N 0.000
OPUNC02G05490 Oryza punctata OPUNC02G05490 N 0.000
OPUNC06G21750 Oryza punctata OPUNC06G21750 N 0.000
orange1.1g042361m.g Citrus sinensis orange1.1g042361m.g N 0.000
ORGLA02G0058300 Oryza glaberrima ORGLA02G0058300 N 0.000
ORGLA06G0201700 Oryza glaberrima ORGLA06G0201700 N 0.000
ORUFI02G05620 Oryza rufipogon ORUFI02G05620 N 0.000
OS02G0172800 Oryza sativa OS02G0172800 N 0.000
OS02G0183000 Oryza sativa OS02G0183000 N 0.000
OS06G0666100 Oryza sativa OS06G0666100 N 0.000
Pavir.Aa03378 Panicum virgatum Pavir.Aa03378 N 0.000
Pavir.Ab00578 Panicum virgatum Pavir.Ab00578 N 0.000
Pavir.Ab00641 Panicum virgatum Pavir.Ab00641 N 0.000
Pavir.Da00255 Panicum virgatum Pavir.Da00255 N 0.000
Pavir.Db00476 Panicum virgatum Pavir.Db00476 N 0.000
Pavir.J35161 Panicum virgatum Pavir.J35161 N 0.000
PDK_20s1316692g001 Phoenix dactylifera PDK_20s1316692g001 N 0.000
PDK_20s1397531g003 Phoenix dactylifera PDK_20s1397531g003 N 0.000
PDK_20s1530701g001 Phoenix dactylifera PDK_20s1530701g001 N 0.000
Pm027672 Prunus mume Pm027672 N 0.000
POPTR_0003s07310 Populus trichocarpa POPTR_0003s07310 N 0.000
POPTR_0006s05950 Populus trichocarpa POPTR_0006s05950 N 0.000
POPTR_0018s12380 Populus trichocarpa POPTR_0018s12380 N 0.000
PRUPE_ppa019806mg Prunus persica PRUPE_ppa019806mg N 0.000
SapurV1A.0210s0200 Salix purpurea SapurV1A.0210s0200 N 0.000
SapurV1A.0306s0210 Salix purpurea SapurV1A.0306s0210 N 0.000
SapurV1A.2696s0020 Salix purpurea SapurV1A.2696s0020 N 0.000
Sb04g004830 Sorghum bicolor Sb04g004830 N 0.000
Sb04g005680 Sorghum bicolor Sb04g005680 N 0.000
Sb10g026620 Sorghum bicolor Sb10g026620 N 0.000
scaffold_303520.1 Arabidopsis lyrata scaffold_303520.1 N 0.000
Si018139m.g Setaria italica Si018139m.g N 0.000
Si019544m.g Setaria italica Si019544m.g N 0.000
Solyc07g007320.1 Solanum lycopersicum Solyc07g007320.1 N 0.000
TCM_006017 Theobroma cacao TCM_006017 N 0.000
TCM_038233 Theobroma cacao TCM_038233 N 0.000
Thhalv10022828m.g Eutrema salsugineum Thhalv10022828m.g N 0.000
Traes_6AS_3CC6C63F9 Triticum aestivum Traes_6AS_3CC6C63F9 N 0.000
Traes_6BS_4DA724E79 Triticum aestivum Traes_6BS_4DA724E79 N 0.000
Traes_6BS_A7DE5BFD1 Triticum aestivum Traes_6BS_A7DE5BFD1 N 0.000
Traes_6DS_9C50DA0DE Triticum aestivum Traes_6DS_9C50DA0DE N 0.000
Traes_6DS_CA4C01DEF Triticum aestivum Traes_6DS_CA4C01DEF N 0.000
Traes_7AL_5E9E6A334 Triticum aestivum Traes_7AL_5E9E6A334 N 0.000
Traes_7DL_B446D4CC6 Triticum aestivum Traes_7DL_B446D4CC6 N 0.000
TRIUR3_16881 Triticum urartu TRIUR3_16881 N 0.000
TRIUR3_33737 Triticum urartu TRIUR3_33737 N 0.000
VIT_01s0011g01410 Vitis vinifera VIT_01s0011g01410 N 0.000
VIT_11s0118g00600 Vitis vinifera VIT_11s0118g00600 N 0.000