ENSBTAP00000011067-D1 (Bos grunniens)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 ENSBTAP00000011067-D1 T134533_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
OVOL2
M00235_2.00
Homo sapiens
NCCGYTANNN

NNNTARCGGN
PBM
Barrera et al.(2016)
OVOL2_REF
0.805 0.935
OVOL2
M04445_2.00
Homo sapiens
NNHCCGYTANNHN

NDNNTARCGGDNN
SELEX
Yin et al.(2017)
OVOL2_eDBD_HT-SELEX
0.805 0.935
OVOL2
M04447_2.00
Homo sapiens
DDWCCGTTABNHN

NDNVTAACGGWHH
SELEX
Yin et al.(2017)
OVOL2_FL_HT-SELEX
0.805 0.935
Ovol2
M08993_2.00
Mus musculus
HCCGTTAN

NTAACGGD
Misc
Kulakovskiy et al.(2013)
OVOL2_MOUSE.H11MO.0.C
0.805 0.935
OVOL2
M10207_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MOVOB_01
0.805 0.935
OVOL2
M04446_2.00
Homo sapiens
NNWCCGTTANNHN

NDNNTAACGGWNN
SELEX
Yin et al.(2017)
OVOL2_eDBD_Methyl-HT-SELEX
0.805 0.935
OVOL2
M04448_2.00
Homo sapiens
DDWCCGTTABNHN

NDNVTAACGGWHH
SELEX
Yin et al.(2017)
OVOL2_FL_Methyl-HT-SELEX
0.805 0.935
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSBTAP00000011067-D1 C2H2 ZF 128 150
ENSBTAP00000011067-D1 C2H2 ZF 156 178
ENSBTAP00000011067-D1 C2H2 ZF 184 207
ENSBTAP00000011067-D1 C2H2 ZF 223 246

Links

Other C2H2 ZF family TFs
Other Bos grunniens TFs

Invalid Input OrderBy

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action