ENSBTAP00000018112-D2 (Bos grunniens)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 ENSBTAP00000018112-D2 T134572_2.00 GigaDB (2015-Oct-22)
NCBI Gene Info:
This gene encodes a tumor suppressor protein containing transcriptional activation, DNA binding, and oligomerization domains. The encoded protein responds to diverse cellular stresses to regulate expression of target genes, thereby inducing cell cycle arrest, apoptosis, senescence, DNA repair, or changes in metabolism. Mutations in this gene are associated with a variety of human cancers, including hereditary cancers such as Li-Fraumeni syndrome. Alternative splicing of this gene and the use of alternate promoters result in multiple transcript variants and isoforms. Additional isoforms have also been shown to result from the use of alternate translation initiation codons from identical transcript variants (PMIDs: 12032546, 20937277). [provided by RefSeq, Dec 2016]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZNF805
M07753_2.00
Homo sapiens
KGBDKKBSTKGGYKTGTG

CACAMRCCMASVMMHVCM
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF805.RCADE.OriginalMapping
0.823 0.983
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSBTAP00000018112-D2 C2H2 ZF 235 257
ENSBTAP00000018112-D2 C2H2 ZF 263 285
ENSBTAP00000018112-D2 C2H2 ZF 291 313
ENSBTAP00000018112-D2 C2H2 ZF 319 341
ENSBTAP00000018112-D2 C2H2 ZF 347 369
ENSBTAP00000018112-D2 C2H2 ZF 375 397
ENSBTAP00000018112-D2 C2H2 ZF 403 425
ENSBTAP00000018112-D2 C2H2 ZF 431 453
ENSBTAP00000018112-D2 C2H2 ZF 459 481
ENSBTAP00000018112-D2 C2H2 ZF 487 509
ENSBTAP00000018112-D2 C2H2 ZF 515 537
ENSBTAP00000018112-D2 C2H2 ZF 543 565
ENSBTAP00000018112-D2 C2H2 ZF 571 593

Links

Other C2H2 ZF family TFs
Other Bos grunniens TFs

Invalid Input OrderBy

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action