CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSBTAP00000022702-D1
(
Bos grunniens
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
ENSBTAP00000022702-D1
T134599_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF384
M04451_2.00
Homo sapiens
TTTTBNNNNNNNNNNNNVAAAA
TTTTBNNNNNNNNNNNNVAAAA
SELEX
Yin et al.(2017)
ZNF384_eDBD_HT-SELEX
0.798
0.995
ZNF384
M08306_2.00
Homo sapiens
CTTTTTTTT
AAAAAAAAG
ChIP-seq
Schmitges et al.(2016)
Q8TF68_1-3.RCADE
0.798
0.995
ZNF384
M08090_2.00
Homo sapiens
WTTTTTTTNHNN
NNDNAAAAAAAW
ChIP-seq
Mathelier et al.(2014)
MA1125.1
0.798
0.995
ZNF384
M08888_2.00
Homo sapiens
BVNNBTTTTTSC
GSAAAAAVNNBV
Misc
Kulakovskiy et al.(2013)
ZN384_HUMAN.H11MO.0.C
0.798
0.995
ZNF384
M10209_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CIZ_01
0.798
0.995
ZNF384
M04452_2.00
Homo sapiens
KTTTYHNNNNNNNNNNDRAAAV
BTTTYHNNNNNNNNNNDRAAAM
SELEX
Yin et al.(2017)
ZNF384_eDBD_Methyl-HT-SELEX
0.798
0.995
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSBTAP00000022702-D1
C2H2 ZF
248
270
YRCRMCSLTFYSKSEMQIHSKSH
ENSBTAP00000022702-D1
C2H2 ZF
276
298
HKCPHCSKTFANSSYLAQHIRIH
ENSBTAP00000022702-D1
C2H2 ZF
304
326
YSCNFCEKSFRQLSHLQQHTRIH
ENSBTAP00000022702-D1
C2H2 ZF
337
359
HKCPHCSKTFANTSYLAQHLRIH
ENSBTAP00000022702-D1
C2H2 ZF
365
387
YNCSYCQKAFRQLSHLQQHTRIH
ENSBTAP00000022702-D1
C2H2 ZF
393
417
YKCAHPGCEKAFTQLSNLQSHRRQH
ENSBTAP00000022702-D1
C2H2 ZF
423
445
FKCHNCHRAYTDATSLEVHLSTH
ENSBTAP00000022702-D1
C2H2 ZF
453
475
YTCTICSRAYTSETYLMKHMRKH
Links
Other
C2H2 ZF
family TFs
Other
Bos grunniens
TFs
41 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy