ENSBTAP00000023928-D1 (Bos grunniens)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 ENSBTAP00000023928-D1 T134606_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GLIS1
M02911_2.00 		Homo sapiens
MGACCCCCCACGWHGN
NCDWCGTGGGGGGTCK		 SELEX
Jolma et al.(2013)
GLIS1_1 		0.827 1.000
GLIS1
M04564_2.00 		Homo sapiens
BMCCCCCCRCVDHSH
DSDHBGYGGGGGGKV		 SELEX
Yin et al.(2017)
GLIS1_eDBD_HT-SELEX 		0.827 1.000
GLIS1
M08345_2.00 		Homo sapiens
SNSYSYRGGRGGBV
BVCCYCCYRSRSNS		 ChIP-seq
Schmitges et al.(2016)
Q8NBF1.MEME 		0.827 1.000
GLIS1
M04565_2.00 		Homo sapiens
DCWHNGTGGGGGGTV
BACCCCCCACNDWGH		 SELEX
Yin et al.(2017)
GLIS1_eDBD_Methyl-HT-SELEX 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSBTAP00000023928-D1 C2H2 ZF 318 345
ENSBTAP00000023928-D1 C2H2 ZF 352 375
ENSBTAP00000023928-D1 C2H2 ZF 381 405
ENSBTAP00000023928-D1 C2H2 ZF 411 435

Links

Other C2H2 ZF family TFs
Other Bos grunniens TFs

Invalid Input OrderBy

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action