ENSBTAP00000024080-D1 (Bos grunniens)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 ENSBTAP00000024080-D1 T134608_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZNF449
M04560_2.00
Homo sapiens
NTGYTKGCWCGCGAB

VTCGCGWGCMARCAN
SELEX
Yin et al.(2017)
ZNF449_eDBD_HT-SELEX_1
0.824 0.988
ZNF449
M04561_2.00
Homo sapiens
RCGCCCAACC

GGTTGGGCGY
SELEX
Yin et al.(2017)
ZNF449_eDBD_HT-SELEX_2
0.824 0.988
ZNF449
M08344_2.00
Homo sapiens
NNVAGCCCARCCHNNNNNNNN

NNNNNNNNDGGYTGGGCTBNN
ChIP-seq
Schmitges et al.(2016)
Q6P9G9_1-7.RCADE
0.824 0.988
ZNF449
M08922_2.00
Homo sapiens
VAGCCCARCCN

NGGYTGGGCTB
Misc
Kulakovskiy et al.(2013)
ZN449_HUMAN.H11MO.0.C
0.824 0.988
ZNF449
M04562_2.00
Homo sapiens
MMGCCCMACC

GGTKGGGCKK
SELEX
Yin et al.(2017)
ZNF449_eDBD_Methyl-HT-SELEX_1
0.824 0.988
ZNF449
M04563_2.00
Homo sapiens
NTGYTKGCDCGCGWB

VWCGCGHGCMARCAN
SELEX
Yin et al.(2017)
ZNF449_eDBD_Methyl-HT-SELEX_2
0.824 0.988
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSBTAP00000024080-D1 C2H2 ZF 324 346
ENSBTAP00000024080-D1 C2H2 ZF 352 374
ENSBTAP00000024080-D1 C2H2 ZF 380 402
ENSBTAP00000024080-D1 C2H2 ZF 408 430
ENSBTAP00000024080-D1 C2H2 ZF 436 458
ENSBTAP00000024080-D1 C2H2 ZF 464 486
ENSBTAP00000024080-D1 C2H2 ZF 492 514

Links

Other C2H2 ZF family TFs
Other Bos grunniens TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSOARG00000011892 Ovis aries ENSOARG00000011892 I 0.827
ZNF449 Sus scrofa ENSSSCG00000012691 I 0.827
ZNF449 Pteropus vampyrus ENSPVAG00000006757 I 0.827
ZNF449 Tursiops truncatus ENSTTRG00000010555 I 0.827
ZNF449 Equus caballus ENSECAG00000003581 I 0.827
ZNF449 Bos taurus ENSBTAG00000018090 I 0.827
Myotis_brandtii_ZNF449_10001399 Myotis brandtii Myotis_brandtii_ZNF449_10001399 I 0.827
ENSEEUG00000003860 Erinaceus europaeus ENSEEUG00000003860 I 0.826
ZNF449 Vicugna pacos ENSVPAG00000002342 I 0.826
ENSETEG00000009064 Echinops telfairi ENSETEG00000009064 I 0.825
ENSPANG00000012789 Papio anubis ENSPANG00000012789 I 0.824
ZNF449 Oryctolagus cuniculus ENSOCUG00000014649 I 0.824
ENSPPYG00000020749 Pongo abelii ENSPPYG00000020749 I 0.824
ENSSTOG00000024213 Ictidomys tridecemlineatus ENSSTOG00000024213 I 0.824
ENSP00000339585 Macaca fascicularis ENSP00000339585 I 0.824
ZNF449 Pan troglodytes ENSPTRG00000022299 I 0.824
ENSMPUG00000012654 Mustela putorius furo ENSMPUG00000012654 I 0.824
ENSCSAG00000007689 Chlorocebus sabaeus ENSCSAG00000007689 I 0.824
ENSFCAG00000024967 Felis catus ENSFCAG00000024967 I 0.824
ENSCPOG00000004042 Cavia porcellus ENSCPOG00000004042 I 0.824
ZNF449 Callithrix jacchus ENSCJAG00000014517 I 0.824
ZNF449 Canis familiaris ENSCAFG00000018905 I 0.824
ZNF449 Homo sapiens ENSG00000173275 D 0.824
ZNF449 Gorilla gorilla ENSGGOG00000000032 I 0.824
ZNF449 Macaca mulatta ENSMMUG00000008108 I 0.824
ENSAMEG00000011267 Ailuropoda melanoleuca ENSAMEG00000011267 I 0.824
ENSNLEG00000002174 Nomascus leucogenys ENSNLEG00000002174 I 0.823
ZNF449 Otolemur garnettii ENSOGAG00000003684 I 0.819
Zfp449 Dipodomys ordii ENSDORG00000003522 I 0.819
Zfp449 Rattus norvegicus ENSRNOG00000050562 I 0.817
Zfp449 Mus musculus ENSMUSG00000073176 I 0.816
ZNF449 Microcebus murinus ENSMICG00000003164 I 0.815
ENSLAFG00000017131 Loxodonta africana ENSLAFG00000017131 I 0.814