CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSBTAP00000024080-D1
(
Bos grunniens
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
ENSBTAP00000024080-D1
T134608_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF449
M04560_2.00
Homo sapiens
NTGYTKGCWCGCGAB
VTCGCGWGCMARCAN
SELEX
Yin et al.(2017)
ZNF449_eDBD_HT-SELEX_1
0.824
0.988
ZNF449
M04561_2.00
Homo sapiens
RCGCCCAACC
GGTTGGGCGY
SELEX
Yin et al.(2017)
ZNF449_eDBD_HT-SELEX_2
0.824
0.988
ZNF449
M08344_2.00
Homo sapiens
NNVAGCCCARCCHNNNNNNNN
NNNNNNNNDGGYTGGGCTBNN
ChIP-seq
Schmitges et al.(2016)
Q6P9G9_1-7.RCADE
0.824
0.988
ZNF449
M08922_2.00
Homo sapiens
VAGCCCARCCN
NGGYTGGGCTB
Misc
Kulakovskiy et al.(2013)
ZN449_HUMAN.H11MO.0.C
0.824
0.988
ZNF449
M04562_2.00
Homo sapiens
MMGCCCMACC
GGTKGGGCKK
SELEX
Yin et al.(2017)
ZNF449_eDBD_Methyl-HT-SELEX_1
0.824
0.988
ZNF449
M04563_2.00
Homo sapiens
NTGYTKGCDCGCGWB
VWCGCGHGCMARCAN
SELEX
Yin et al.(2017)
ZNF449_eDBD_Methyl-HT-SELEX_2
0.824
0.988
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSBTAP00000024080-D1
C2H2 ZF
324
346
HRCSQCGKCFARKSQLTGHQRIH
ENSBTAP00000024080-D1
C2H2 ZF
352
374
HKCPECGKRFLRSSDLYRHQRLH
ENSBTAP00000024080-D1
C2H2 ZF
380
402
YECTVCKKRFTRRSHLIGHQRTH
ENSBTAP00000024080-D1
C2H2 ZF
408
430
YKCLECGKSFCHGSSLKRHLKTH
ENSBTAP00000024080-D1
C2H2 ZF
436
458
HRCHNCGKSFSRLTALTLHQRTH
ENSBTAP00000024080-D1
C2H2 ZF
464
486
FKCNYCGKSFRQRPSLVIHLRIH
ENSBTAP00000024080-D1
C2H2 ZF
492
514
YKCSHCSKSFRQRAGLIMHQVTH
Links
Other
C2H2 ZF
family TFs
Other
Bos grunniens
TFs
33 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy