ENSBTAP00000039405-D1 (Bos grunniens)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 ENSBTAP00000039405-D1 T134646_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
REST
M08084_2.00
Homo sapiens
GSHGCTGTCCRWGGTSCTGAH

DTCAGSACCWYGGACAGCDSC
ChIP-seq
Mathelier et al.(2014)
MA0138.2
0.827 1.000
REST
M07846_2.00
Homo sapiens
TCCVHGGTGCTGAM

KTCAGCACCDBGGA
ChIP-seq
Gerstein et al.(2012)
GM12878_NRSF_HudsonAlpha
0.827 1.000
REST
M07847_2.00
Homo sapiens
GCTGTCCRHGGTGCT

AGCACCDYGGACAGC
ChIP-seq
Gerstein et al.(2012)
H1-hESC_NRSF_HudsonAlpha
0.827 1.000
REST
M07848_2.00
Homo sapiens
HGCTGTCCRWGGTSCT

AGSACCWYGGACAGCD
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_NRSF_HudsonAlpha
0.827 1.000
REST
M07849_2.00
Homo sapiens
TGTCCRHGGTGCTGA

TCAGCACCDYGGACA
ChIP-seq
Gerstein et al.(2012)
HepG2_NRSF_HudsonAlpha
0.827 1.000
REST
M07850_2.00
Homo sapiens
TGTCCVHGGTGCTGA

TCAGCACCDBGGACA
ChIP-seq
Gerstein et al.(2012)
HTB-11_NRSF_HudsonAlpha
0.827 1.000
REST
M07851_2.00
Homo sapiens
CTGTCCVHGGTGCTGA

TCAGCACCDBGGACAG
ChIP-seq
Gerstein et al.(2012)
K562_NRSF_HudsonAlpha
0.827 1.000
REST
M07852_2.00
Homo sapiens
GSHGCTGTCCRHGGTGCTGAM

KTCAGCACCDYGGACAGCDSC
ChIP-seq
Gerstein et al.(2012)
PANC-1_NRSF_HudsonAlpha
0.827 1.000
REST
M07853_2.00
Homo sapiens
CTGTCCRHGGTGCTG

CAGCACCDYGGACAG
ChIP-seq
Gerstein et al.(2012)
PFSK-1_NRSF_HudsonAlpha
0.827 1.000
REST
M07854_2.00
Homo sapiens
GSHGCTGTCCRHGGT

ACCDYGGACAGCDSC
ChIP-seq
Gerstein et al.(2012)
U87_NRSF_HudsonAlpha
0.827 1.000
REST
M08861_2.00
Homo sapiens
DGSHGCTGTCCRHGGTGCTGAH

DTCAGCACCDYGGACAGCDSCH
Misc
Kulakovskiy et al.(2013)
REST_HUMAN.H11MO.0.A
0.827 1.000
REST
M09501_2.00
Homo sapiens
GGHGCTGTCCRWGGTGCTGA

TCAGCACCWYGGACAGCDCC
Misc
Heinz et al.(2010)
Jurkat-NRSF
0.827 1.000
REST
M10116_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NRSE_B
0.827 1.000
REST
M10117_2.00
Homo sapiens
GSYKCTGTCCGYGGTGCTGAA

TTCAGCACCRCGGACAGMRSC
Transfac
Matys et al.(2006)
V$NRSF_01
0.827 1.000
REST
M10118_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$REST_01
0.827 1.000
REST
M10119_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$REST_04
0.827 1.000
REST
M10120_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$REST_05
0.827 1.000
REST
M10121_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$REST_06
0.827 1.000
REST
M10122_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$REST_10
0.827 1.000
REST
M10123_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$REST_12
0.827 1.000
REST
M10124_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$REST_Q5
0.827 1.000
Rest
M10362_2.00
Rattus norvegicus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NRSF_Q4
0.826 0.988
Rest
M08983_2.00
Mus musculus
DGBHGCTGTCCDHGGTSCTGRH

DYCAGSACCDHGGACAGCDVCH
Misc
Kulakovskiy et al.(2013)
REST_MOUSE.H11MO.0.A
0.820 0.981
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSBTAP00000039405-D1 C2H2 ZF 215 237
ENSBTAP00000039405-D1 C2H2 ZF 247 269
ENSBTAP00000039405-D1 C2H2 ZF 275 297
ENSBTAP00000039405-D1 C2H2 ZF 303 325
ENSBTAP00000039405-D1 C2H2 ZF 331 354
ENSBTAP00000039405-D1 C2H2 ZF 360 382
ENSBTAP00000039405-D1 C2H2 ZF 388 411

Links

Other C2H2 ZF family TFs
Other Bos grunniens TFs

57 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000008541 Ailuropoda melanoleuca ENSAMEG00000008541 I 0.827
Alligator_sinensis_CCG021969.1 Alligator sinensis Alligator_sinensis_CCG021969.1 I 0.782
ENSAPLG00000009372 Anas platyrhynchos ENSAPLG00000009372 I 0.782
REST Anolis carolinensis ENSACAG00000002355 I 0.786
Afo_R012862 Aptenodytes forsteri Afo_R012862 I 0.782
ENSP00000311816-D1 Bos grunniens ENSP00000311816-D1 I 0.827
ENSBTAG00000019359 Bos taurus ENSBTAG00000019359 I 0.827
ENSBTAG00000011789 Bos taurus ENSBTAG00000011789 I 0.827
Brh_R004325 Buceros rhinoceros Brh_R004325 I 0.782
REST Callithrix jacchus ENSCJAG00000004081 I 0.827
Aan_R014984 Calypte anna Aan_R014984 I 0.775
REST Canis familiaris ENSCAFG00000002254 I 0.827
ENSCSAG00000005119 Chlorocebus sabaeus ENSCSAG00000005119 I 0.827
rest Danio rerio ENSDARG00000103046 I 0.760
REST Dasypus novemcinctus ENSDNOG00000049113 I 0.827
REST Equus caballus ENSECAG00000022536 I 0.824
REST Erinaceus europaeus ENSEEUG00000001134 I 0.820
REST Felis catus ENSFCAG00000003904 I 0.827
ENSFALG00000006682 Ficedula albicollis ENSFALG00000006682 I 0.782
ENSGALG00000011390 Gallus gallus ENSGALG00000011390 I 0.782
Gfo_R000933 Geospiza fortis Gfo_R000933 I 0.782
REST Gorilla gorilla ENSGGOG00000002165 I 0.827
REST Homo sapiens ENSG00000084093 D 0.827
ENSSTOG00000007375 Ictidomys tridecemlineatus ENSSTOG00000007375 I 0.827
REST Loxodonta africana ENSLAFG00000003195 I 0.825
ENSP00000311816 Macaca fascicularis ENSP00000311816 I 0.827
REST Macaca mulatta ENSMMUG00000018821 I 0.827
ENSMEUG00000010330 Macropus eugenii ENSMEUG00000010330 I 0.780
ENSMGAG00000008536 Meleagris gallopavo ENSMGAG00000008536 I 0.782
ENSMICG00000017078 Microcebus murinus ENSMICG00000017078 I 0.827
ENSMODG00000020702 Monodelphis domestica ENSMODG00000020702 I 0.779
Rest Mus musculus ENSMUSG00000029249 D 0.820
Myotis_brandtii_REST_10026791 Myotis brandtii Myotis_brandtii_REST_10026791 I 0.821
REST Myotis lucifugus ENSMLUG00000014530 I 0.827
ENSNLEG00000008836 Nomascus leucogenys ENSNLEG00000008836 I 0.827
REST Ochotona princeps ENSOPRG00000008088 I 0.827
REST Oryctolagus cuniculus ENSOCUG00000001776 I 0.827
ENSOGAG00000015986 Otolemur garnettii ENSOGAG00000015986 I 0.827
ENSOARG00000004929 Ovis aries ENSOARG00000004929 I 0.827
ENSOARG00000005019 Ovis aries ENSOARG00000005019 I 0.827
REST Pan troglodytes ENSPTRG00000016087 I 0.827
ENSPANG00000017819 Papio anubis ENSPANG00000017819 I 0.827
ENSPSIG00000002988 Pelodiscus sinensis ENSPSIG00000002988 I 0.782
Pvit_05779 Pogona vitticeps Pvit_05779 I 0.786
ENSPPYG00000014745 Pongo abelii ENSPPYG00000014745 I 0.827
REST Pteropus vampyrus ENSPVAG00000010391 I 0.827
Rest Rattus norvegicus ENSRNOG00000002074 D 0.826
ENSSHAG00000016270 Sarcophilus harrisii ENSSHAG00000016270 I 0.780
ENSSARG00000010385 Sorex araneus ENSSARG00000010385 I 0.827
REST Sus scrofa ENSSSCG00000023357 I 0.808
ENSSSCG00000008893 Sus scrofa ENSSSCG00000008893 I 0.808
ENSTGUG00000004749 Taeniopygia guttata ENSTGUG00000004749 I 0.782
REST Tupaia belangeri ENSTBEG00000014480 I 0.827
Tal_R011864 Tyto alba Tal_R011864 I 0.782
rest.L Xenopus laevis XB-GENE-6256442 I 0.763
rest.S Xenopus laevis XB-GENE-955471 I 0.767
rest Xenopus tropicalis XB-GENE-955466 I 0.765