CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSP00000251020
(
Macaca fascicularis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
ENSP00000251020
T134922_2.00
GigaDB (2015-Oct-22)
NCBI Gene Info:
The protein encoded by this gene is a zinc finger transcriptional repressor and may be part of the NuRD histone deacetylase complex (HDAC). Defects in this gene are a cause of Townes-Brocks syndrome (TBS) as well as bronchio-oto-renal syndrome (BOR). Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Sall1
M10342_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SALL1_04
0.827
1.000
Sall1
M10343_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SALL1_05
0.827
1.000
Sall1
M10344_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SALL1_06
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSP00000251020
C2H2 ZF
363
385
HKCRFCAKVFGSDSALQIHLRSH
ENSP00000251020
C2H2 ZF
391
413
FKCNICGNRFSTKGNLKVHFQRH
ENSP00000251020
C2H2 ZF
648
670
FKCKICGRAFTTKGNLKTHYSVH
ENSP00000251020
C2H2 ZF
680
702
HSCPICQKKFTNAVVLQQHIRMH
ENSP00000251020
C2H2 ZF
915
937
TACDICGKTFACQSALDIHYRSH
ENSP00000251020
C2H2 ZF
943
965
FICTVCNRGFSTKGNLKQHMLTH
ENSP00000251020
C2H2 ZF
1048
1070
HYCNTCGKTFSSSSALQIHERTH
ENSP00000251020
C2H2 ZF
1076
1098
FACTICGRAFTTKGNLKVHMGTH
Links
Other
C2H2 ZF
family TFs
Other
Macaca fascicularis
TFs
50 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy