CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ENSP00000266269-D1
(
Bos grunniens
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
ENSP00000266269-D1
T134951_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PATZ1
M08287_2.00
Homo sapiens
CCCCDCCC
GGGHGGGG
ChIP-seq
Schmitges et al.(2016)
Q9HBE1.MEME
0.827
1.000
PATZ1
M08864_2.00
Homo sapiens
NYBCHNBYBCMKYCYCYBCCMY
RKGGVRGRGRMKGVRVNDGVRN
Misc
Kulakovskiy et al.(2013)
PATZ1_HUMAN.H11MO.0.C
0.827
1.000
PATZ1
M10137_2.00
Homo sapiens
NDDCCCCCCCCSH
DSGGGGGGGGHHN
Transfac
Matys et al.(2006)
V$MAZR_01
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSP00000266269-D1
C2H2 ZF
292
314
LPCGLCGKVFTDANRLRQHEAQH
ENSP00000266269-D1
C2H2 ZF
356
377
ACEICGKIFRDVYHLNRHKLSH
ENSP00000266269-D1
C2H2 ZF
383
405
YSCPVCGLRFKRKDRMSYHVRSH
ENSP00000266269-D1
C2H2 ZF
413
436
YICQSCGKGFSRPDHLNGHIKQVH
ENSP00000266269-D1
C2H2 ZF
442
464
HKCQTCNASFATRDRLRSHLACH
ENSP00000266269-D1
C2H2 ZF
496
518
FCSICNRGFSSASYLKVHVKTHH
Links
Other
C2H2 ZF
family TFs
Other
Bos grunniens
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy