CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSP00000269834
(
Macaca fascicularis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
ENSP00000269834
T134956_2.00
GigaDB (2015-Oct-22)
NCBI Gene Info:
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Apr 2022]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZIM3
M08312_2.00
Homo sapiens
NNKRGNTTTCTGTTDNYN
NRNHAACAGAAANCYMNN
ChIP-seq
Schmitges et al.(2016)
Q96PE6_5-10.RCADE
0.779
0.917
ZIM3
M07591_2.00
Homo sapiens
RGVTTTCTGTTK
MAACAGAAABCY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZIM3.RCADE.OriginalMapping
0.779
0.917
ZIM3
M08895_2.00
Homo sapiens
NKRGNTTTCTGTTDHYNNH
DNNRDHAACAGAAANCYMN
Misc
Kulakovskiy et al.(2013)
ZIM3_HUMAN.H11MO.0.C
0.779
0.917
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSP00000269834
C2H2 ZF
163
185
LKCDACRKLFGSESRLQSHLRQH
ENSP00000269834
C2H2 ZF
191
213
FECRCCGRAFGKKWKLDKHQKTH
ENSP00000269834
C2H2 ZF
219
241
YKCEKCGNAYKQKSNLLQHQKVH
ENSP00000269834
C2H2 ZF
247
269
YQCKTCGKAFSWKSSCINHEKIH
ENSP00000269834
C2H2 ZF
275
297
YQCHECEKSFRQNSTLLQHKKVH
ENSP00000269834
C2H2 ZF
303
325
FQCPDCGKAFIYKSDLVKHQRTH
ENSP00000269834
C2H2 ZF
331
353
YKCNVCEKAFSQKSNVIDHEKIH
ENSP00000269834
C2H2 ZF
359
381
YECDLCGNTFIQKKNLIQHKKIH
ENSP00000269834
C2H2 ZF
387
409
YECNRCGKAFLQKSNLHTHQKTH
ENSP00000269834
C2H2 ZF
415
437
YRCSECGKTFNRKLNLSLHKKTH
ENSP00000269834
C2H2 ZF
443
466
YECSECGKAFADKSYLVRHQKRIH
Links
Other
C2H2 ZF
family TFs
Other
Macaca fascicularis
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy