CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSP00000300870-D85
(
Bos grunniens
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
ENSP00000300870-D85
T135014_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF354A
M08331_2.00
Homo sapiens
RTTTARDCCATTTAY
RTAAATGGHYTAAAY
ChIP-seq
Schmitges et al.(2016)
O60765_5-9.RCADE
0.824
0.987
ZNF354A
M07622_2.00
Homo sapiens
RTTTARHCCATTTAC
GTAAATGGDYTAAAY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF354A.RCADE.OriginalMapping
0.824
0.987
ZNF354A
M08914_2.00
Homo sapiens
DTTYHDNYCHTTTMYWTTTADTGW
WCAHTAAAWRKAAADGRNHDRAAH
Misc
Kulakovskiy et al.(2013)
Z354A_HUMAN.H11MO.0.C
0.824
0.987
ZNF354B
M07653_2.00
Homo sapiens
RDWTAKYYCMTT
AAKGRRMTAWHY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF354B.RCADE.ReprocessedData
0.777
0.923
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSP00000300870-D85
C2H2 ZF
339
361
YKCSMCEKTFINTSSLRKHEKNH
ENSP00000300870-D85
C2H2 ZF
367
389
FKCKDCSKAFNQSSALIQHQITH
ENSP00000300870-D85
C2H2 ZF
395
417
YICKECGKAFTLSTSLYKHLRTH
ENSP00000300870-D85
C2H2 ZF
423
445
YRCKECGKSFSRRSGLFIHQKIH
ENSP00000300870-D85
C2H2 ZF
479
501
YLCNECGNTFKSSSSLRYHQRIH
ENSP00000300870-D85
C2H2 ZF
507
529
FKCSECGRAFSQSASLIQHERIH
ENSP00000300870-D85
C2H2 ZF
535
557
YRCNECGKGFTSISRLNRHRIIH
ENSP00000300870-D85
C2H2 ZF
563
585
YNCNECGKALSSHSTLIIHERIH
ENSP00000300870-D85
C2H2 ZF
591
613
CKCKVCGKAFRQSSALIQHQRMH
ENSP00000300870-D85
C2H2 ZF
619
641
YKCNECGKTFRCNSSLSNHQRIH
ENSP00000300870-D85
C2H2 ZF
647
669
YRCEDCGISFGQSSALIQHRRIH
ENSP00000300870-D85
C2H2 ZF
675
697
FKCNTCGKTFRQSSSRIAHQRIH
ENSP00000300870-D85
C2H2 ZF
703
725
YECNTCGKLFNHRSSLTNHYKIH
Links
Other
C2H2 ZF
family TFs
Other
Bos grunniens
TFs
50 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy