CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ENSP00000325546-D1
(
Bos grunniens
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
ENSP00000325546-D1
T135115_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PLAG1
M06465_2.00
Homo sapiens
CCCCCKWDGGCCCC
GGGGCCHWMGGGGG
B1H
Mathelier et al.(2014)
MA0163.1
0.820
0.988
PLAG1
M10286_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PLAG1_01
0.820
0.988
PLAG1
M10287_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PLAG1_02
0.820
0.988
PLAG1
M10288_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PLAG1_08
0.820
0.988
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSP00000325546-D1
C2H2 ZF
34
56
FPCQLCDKAFNSVEKLKVHSYSH
ENSP00000325546-D1
C2H2 ZF
62
86
YKCIQQDCTKAFVSKYKLQRHMATH
ENSP00000325546-D1
C2H2 ZF
92
114
HKCNYCEKMFHRKDHLKNHLHTH
ENSP00000325546-D1
C2H2 ZF
121
143
FKCEECGKSYNTKLGFKRHLALH
ENSP00000325546-D1
C2H2 ZF
150
172
LTCKVCLQTFESTGVLLEHLKSH
ENSP00000325546-D1
C2H2 ZF
185
207
HPCEHCDRRFYTRKDVRRHMVVH
ENSP00000325546-D1
C2H2 ZF
213
236
FLCQYCAQRFGRKDHLTRHMKKSH
Links
Other
C2H2 ZF
family TFs
Other
Bos grunniens
TFs
54 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy