ENSP00000340841-D1 (Bos grunniens)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 ENSP00000340841-D1 T135196_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZNF621
M08254_2.00
Homo sapiens
CTKCCCTGRGMBYYY

RRRVKCYCAGGGMAG
ChIP-seq
Najafabadi et al.(2015b)
ZNF621
0.768 0.944
ZNF621
M07636_2.00
Homo sapiens
CTKCCCTGRGABWTW

WAWVTCYCAGGGMAG
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF621.MEME.OriginalMapping
0.768 0.944
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000340841-D1 C2H2 ZF 144 166
ENSP00000340841-D1 C2H2 ZF 172 194
ENSP00000340841-D1 C2H2 ZF 200 222
ENSP00000340841-D1 C2H2 ZF 228 250
ENSP00000340841-D1 C2H2 ZF 256 278
ENSP00000340841-D1 C2H2 ZF 284 306
ENSP00000340841-D1 C2H2 ZF 312 334

Links

Other C2H2 ZF family TFs
Other Bos grunniens TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bm9299 Brugia malayi Bm9299 N 0.000
L892_g15981 Steinernema scapterisci L892_g15981 N 0.000
L893_g3205 Steinernema glaseri L893_g3205 N 0.000
L898_g24307 Steinernema monticolum L898_g24307 N 0.000
nAv.1.0.1.g09990 Acanthocheilonema viteae nAv.1.0.1.g09990 N 0.000
NBR_0000089501 Nippostrongylus brasiliensis NBR_0000089501 N 0.000
nDi.2.2.2.g04918 Dirofilaria immitis nDi.2.2.2.g04918 N 0.000
NECAME_00195 Necator americanus NECAME_00195 N 0.000
nLs.2.1.2.g05791 Litomosoides sigmodontis nLs.2.1.2.g05791 N 0.000
nOo.2.0.1.g09190 Onchocerca ochengi nOo.2.0.1.g09190 N 0.000
OESDEN_17196 Oesophagostomum dentatum OESDEN_17196 N 0.000
SMUV_0000860001 Syphacia muris SMUV_0000860001 N 0.000
TCLT_0000665401 Thelazia callipaeda TCLT_0000665401 N 0.000
TELCIR_08516 Teladorsagia circumcincta TELCIR_08516 N 0.000
L889_g13736 Steinernema feltiae L889_g13736 N 0.000
L596_g26851 Steinernema carpocapsae L596_g26851 N 0.000
HPLM_0001243201 Haemonchus placei HPLM_0001243201 N 0.000
CBG12575 Caenorhabditis briggsae CBG12575 N 0.000
CBN10485 Caenorhabditis brenneri CBN10485 N 0.000
CJA15011 Caenorhabditis japonica CJA15011 N 0.000
LOAG_03829 Loa loa LOAG_03829 N 0.000
cebp-2 Caenorhabditis elegans WBGene00016754 N 0.000
WBGene00238092 Onchocerca volvulus WBGene00238092 N 0.000
ALUE_0000443201 Ascaris lumbricoides ALUE_0000443201 N 0.000
ANCDUO_23123 Ancylostoma duodenale ANCDUO_23123 N 0.000
ASU_09498 Ascaris suum ASU_09498 N 0.000
BTMF_0001646101 Brugia timori BTMF_0001646101 N 0.000
Hba_08585 Heterorhabditis bacteriophora Hba_08585 N 0.000
HCOI00796700 Haemonchus contortus HCOI00796700 N 0.000
HPBE_0000922401 Heligmosomoides bakeri HPBE_0000922401 N 0.000
TELCIR_23227 Teladorsagia circumcincta TELCIR_23227 N 0.000