ENSP00000352444-D81 (Bos grunniens)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 ENSP00000352444-D81 T135257_2.00 GigaDB (2015-Oct-22)
NCBI Gene Info:
This gene encodes a member of the zinc finger family of proteins. This gene shows decreased expression in cumulus cells derived from patients undergoing controlled ovarian stimulation. This gene is present in a gene cluster with several related zinc finger genes in the pericentromeric region of chromosome 10. Pseudogenes have been identified on chromosomes 7 and 10. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Feb 2015]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZFP90
M07672_2.00 		Homo sapiens
CYTTAGCTGYRT
AYRCAGCTAARG		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZFP90.RCADE.OriginalMapping 		0.801 0.980
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000352444-D81 C2H2 ZF 269 291
ENSP00000352444-D81 C2H2 ZF 312 334
ENSP00000352444-D81 C2H2 ZF 340 362
ENSP00000352444-D81 C2H2 ZF 368 390
ENSP00000352444-D81 C2H2 ZF 396 418
ENSP00000352444-D81 C2H2 ZF 424 446
ENSP00000352444-D81 C2H2 ZF 452 474
ENSP00000352444-D81 C2H2 ZF 508 530
ENSP00000352444-D81 C2H2 ZF 556 578
ENSP00000352444-D81 C2H2 ZF 584 606
ENSP00000352444-D81 C2H2 ZF 612 634
ENSP00000352444-D81 C2H2 ZF 640 662
ENSP00000352444-D81 C2H2 ZF 668 690

Links

Other C2H2 ZF family TFs
Other Bos grunniens TFs

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26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action