ENSP00000366527-D1 (Bos grunniens)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 ENSP00000366527-D1 T135344_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZSCAN16
M02924_2.00
Homo sapiens
MRTGTTAACAGAACACCY

RGGTGTTCTGTTAACAYK
SELEX
Jolma et al.(2013)
ZNF435_1
0.824 0.978
ZSCAN16
M04623_2.00
Homo sapiens
HGAGGCTCTGTTAACAHTB

VADTGTTAACAGAGCCTCD
SELEX
Yin et al.(2017)
ZSCAN16_eDBD_HT-SELEX
0.824 0.978
ZSCAN16
M04625_2.00
Homo sapiens
NGAGGCTCTGTTAACANYN

NRNTGTTAACAGAGCCTCN
SELEX
Yin et al.(2017)
ZSCAN16_FL_HT-SELEX
0.824 0.978
ZSCAN16
M08377_2.00
Homo sapiens
RTRTRTRTATRTRTRTRTATATRT

AYATATAYAYAYAYATAYAYAYAY
ChIP-seq
Schmitges et al.(2016)
Q9H4T2.MEME
0.824 0.978
ZSCAN16
M04624_2.00
Homo sapiens
HGAGGCTCTGTTAACAHTB

VADTGTTAACAGAGCCTCD
SELEX
Yin et al.(2017)
ZSCAN16_eDBD_Methyl-HT-SELEX
0.824 0.978
ZSCAN16
M04626_2.00
Homo sapiens
NGAGGCTCTGTTAACAHTN

NADTGTTAACAGAGCCTCN
SELEX
Yin et al.(2017)
ZSCAN16_FL_Methyl-HT-SELEX
0.824 0.978
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000366527-D1 C2H2 ZF 236 258
ENSP00000366527-D1 C2H2 ZF 264 286
ENSP00000366527-D1 C2H2 ZF 292 314
ENSP00000366527-D1 C2H2 ZF 320 342

Links

Other C2H2 ZF family TFs
Other Bos grunniens TFs

Invalid Input OrderBy

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action