ENSP00000388045-D1 (Bos grunniens)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 ENSP00000388045-D1 T135483_2.00 GigaDB (2015-Oct-22)
NCBI Gene Info:
This gene encodes a tumor suppressor protein containing transcriptional activation, DNA binding, and oligomerization domains. The encoded protein responds to diverse cellular stresses to regulate expression of target genes, thereby inducing cell cycle arrest, apoptosis, senescence, DNA repair, or changes in metabolism. Mutations in this gene are associated with a variety of human cancers, including hereditary cancers such as Li-Fraumeni syndrome. Alternative splicing of this gene and the use of alternate promoters result in multiple transcript variants and isoforms. Additional isoforms have also been shown to result from the use of alternate translation initiation codons from identical transcript variants (PMIDs: 12032546, 20937277). [provided by RefSeq, Dec 2016]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Plagl1
M00130_2.00
Mus musculus
NNNVCCCCHN

NDGGGGBNNN
PBM
Badis et al.(2009)
Plagl1_0972
0.780 0.862
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000388045-D1 C2H2 ZF 4 26
ENSP00000388045-D1 C2H2 ZF 32 56
ENSP00000388045-D1 C2H2 ZF 62 84
ENSP00000388045-D1 C2H2 ZF 91 113
ENSP00000388045-D1 C2H2 ZF 156 178
ENSP00000388045-D1 C2H2 ZF 184 207

Links

Other C2H2 ZF family TFs
Other Bos grunniens TFs

Invalid Input OrderBy

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action