CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSP00000409597-D73
(
Bos grunniens
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
ENSP00000409597-D73
T135568_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF12
M04515_2.00
Homo sapiens
NVYGCKRTAACAARYAKSMCC
GGKSMTRYTTGTTAYMGCRBN
SELEX
Yin et al.(2017)
ZNF12_eDBD_HT-SELEX
0.823
0.971
ZNF12
M07611_2.00
Homo sapiens
BNYBYSTYNYNGCNGCNS
SNGCNGCNRNRASRVRNV
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF12.RCADE.OriginalMapping
0.823
0.971
ZNF12
M04516_2.00
Homo sapiens
NVYGCWRTAACGAGYABCMCC
GGKGVTRCTCGTTAYWGCRBN
SELEX
Yin et al.(2017)
ZNF12_eDBD_Methyl-HT-SELEX
0.823
0.971
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSP00000409597-D73
C2H2 ZF
311
333
YECNACGKSFCKKSKFIIHQRTH
ENSP00000409597-D73
C2H2 ZF
339
361
YECNQCGKSFCQKGTLTVHQRTH
ENSP00000409597-D73
C2H2 ZF
367
389
YECTECGKTFYQKLHLIQHQRTH
ENSP00000409597-D73
C2H2 ZF
395
417
YECSYCGKAFCQKTHLTQHQRTH
ENSP00000409597-D73
C2H2 ZF
423
445
YVCHDCGKTFSQKSALNDHQKIH
ENSP00000409597-D73
C2H2 ZF
451
473
YKCNECGKCFCRKSTLTTHQRTH
ENSP00000409597-D73
C2H2 ZF
479
501
YECNECGKFFSRLSYLTVHYRTH
ENSP00000409597-D73
C2H2 ZF
507
529
YECNECGKTFYLNSALMRHQRVH
ENSP00000409597-D73
C2H2 ZF
535
557
YECNECGKLFSQLSYLTIHHRTH
ENSP00000409597-D73
C2H2 ZF
563
585
YECNECGKTFYQNSALCRHRRIH
ENSP00000409597-D73
C2H2 ZF
591
613
YECYICGKFFSQMSYLTIHHRIH
ENSP00000409597-D73
C2H2 ZF
619
641
YECNECGKTFCQNSALNRHQRTH
ENSP00000409597-D73
C2H2 ZF
647
669
YECYECGKFFSQMSYLTIHHRIH
ENSP00000409597-D73
C2H2 ZF
675
697
FECNECGKAFSRMSYLTVHYRTH
ENSP00000409597-D73
C2H2 ZF
703
725
YECTECGKKFYHKSAFNSHQRIH
Links
Other
C2H2 ZF
family TFs
Other
Bos grunniens
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy